RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 C2CD4BA6NLJ0 364 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 F8W810 466 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 TMEM189-UBE2V1I3L0A0 370 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 ZMYND10O75800 440 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 PDGFRAP16234 1089 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 NPR3P17342 541 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 TYMPP19971 482 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 GPD1P21695 349 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 TAF5Q15542 800 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 TMCO3Q6UWJ1 677 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 CCNI2Q6ZMN8 369 aaPredicted RBP13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 PIGZQ86VD9 579 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 RCOR2Q8IZ40 523 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 ZDHHC14Q8IZN3 488 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 RUBCNQ92622 972 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 PIWIL1Q96J94 861 aaKnown RBP13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 HINFPQ9BQA5 517 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 CNPY3Q9BT09 278 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 SLITRK6Q9H5Y7 841 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 TMEM39AQ9NV64 488 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 ASNSD1Q9NWL6 643 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 STIM2Q9P246 746 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 TBX21Q9UL17 535 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 PCDHB8Q9UN66 801 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 ATP11BQ9Y2G3 1177 aa13.98□□□□□ -0.17
CEACAM1-206ENST00000403136 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 RAD51CO43502 376 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 LRCH4O75427 683 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 ERLIN1O75477 346 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 GRAP2O75791 330 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 RNF8O76064 485 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 BEST1O76090 585 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 FAM200BP0CF97 657 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 LCP1P13796 627 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 GJC1P36383 396 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 SCNN1AP37088 669 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 LBX1P52954 281 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 OVOS1Q6IE37 1185 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 FAM171BQ6P995 826 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 MAATS1Q7Z4T9 603 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 DEFB128Q7Z7B8 93 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 PRELID2Q8N945 189 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 CCDC26Q8TAB7 109 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 KCTD13Q8WZ19 329 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 PCED1BQ96HM7 432 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 NRDE2Q9H7Z3 1164 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 ARFGAP3Q9NP61 516 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 DNAJB4Q9UDY4 337 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 MTUS1Q9ULD2 1270 aa13.97□□□□□ -0.17
CEACAM1-206ENST00000403136 HOXA2O43364 376 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 GLI1P08151 1106 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 RARAP10276 462 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 FLT3P36888 993 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 CETN2P41208 172 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 LLGL1Q15334 1064 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 HADHQ16836 314 aaKnown RBP13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 TXNRD3NBQ6F5E7 133 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 TRNP1Q6NT89 227 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 CLEC20AQ6ZU45 233 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 SLC26A9Q7LBE3 791 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 POLNQ7Z5Q5 900 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 MAIP1Q8WWC4 291 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 PAWRQ96IZ0 340 aaKnown RBP13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 C11orf49Q9H6J7 331 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 DDX56Q9NY93 547 aaKnown RBP13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 AMACRQ9UHK6 382 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 PRG3Q9Y2Y8 225 aaPredicted RBP13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 TET1Q8NFU7 2136 aa13.96□□□□□ -0.17
CEACAM1-206ENST00000403136 TRAPPC3O43617 180 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 TADA2AO75478 443 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 AP1G2O75843 785 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 ALDH2P05091 517 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 PCK1P35558 622 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 GATMP50440 423 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 CDR1P51861 262 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 MAP3K7CLP57077 242 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 SLC25A11Q02978 314 aaKnown RBP13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 SIX1Q15475 284 aaPredicted RBP13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 CCDC14Q49A88 953 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 INTS6LQ5JSJ4 861 aaKnown RBP13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 ZFYVE27Q5T4F4 411 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 ARCQ7LC44 396 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 MTERF4Q7Z6M4 381 aaKnown RBP13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 FAM35AQ86V20 835 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 NPAS4Q8IUM7 802 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 CCDC50Q8IVM0 306 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 IFT20Q8IY31 132 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 CLEC4CQ8WTT0 213 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 MAGOHBQ96A72 148 aaKnown RBP13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 RBM41Q96IZ5 413 aaKnown RBP13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 SMOQ99835 787 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 UBXN6Q9BZV1 441 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 EPB41L5Q9HCM4 733 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 ZNF446Q9NWS9 450 aa13.96□□□□□ -0.18
CEACAM1-206ENST00000403136 DPYSL4O14531 572 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 NRP1O14786 923 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms