RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 MGAT4DA6NG13 374 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 IGF2BP3O00425 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 SRGNP10124 158 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 PSMC3P17980 439 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 C1DQ13901 141 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 PLCL1Q15111 1095 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 DENND5BQ6ZUT9 1274 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 UCMAQ8WVF2 138 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 OLFM1Q99784 485 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 C7orf25Q9BPX7 421 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 KIF1BO60333 1816 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 LOC100653049A0A140TA62 436 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 CNOT3O75175 753 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 KRT34O76011 436 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 TGM2P21980 687 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 ATP12AP54707 1039 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 DGKDQ16760 1214 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 SLC44A4Q53GD3 710 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 PDP2Q9P2J9 529 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 IPPQ9Y573 584 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 USP6P35125 1406 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 AKR1B1P15121 316 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 TFE3P19532 575 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 COMTP21964 271 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 CDK20Q8IZL9 346 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 COLEC11Q9BWP8 271 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 SHCBP1LQ9BZQ2 653 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 ABI2Q9NYB9 513 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 ERBB3P21860 1342 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 KANSL1LA0AUZ9 987 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 CST8O60676 142 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 THRAP10827 490 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 UCHL3P15374 230 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 ACADSP16219 412 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 POU1F1P28069 291 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 PURAQ00577 322 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 NFYCQ13952 458 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 C19orf81C9J6K1 198 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 EGFRP00533 1210 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 ITGA9Q13797 1035 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 CARNMT1Q8N4J0 409 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 FRMD8Q9BZ67 464 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 UBE2OQ9C0C9 1292 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 ZCCHC17Q9NP64 241 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 FAM153AQ9UHL3 310 aa12.74□□□□□ -0.37
CACNA1C-219ENST00000399649 SSU72P8A0A1W2PR75 194 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 RAD51CO43502 376 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 SUPT7LO94864 414 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 PRKCEQ02156 737 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 PHACTR4Q8IZ21 702 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 OR2W6PQ8NHA6 318 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 FRMD8P1Q9BZ68 369 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 DLGAP2Q9P1A6 1054 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 KLHL3Q9UH77 587 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CDHR2Q9BYE9 1310 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 SAC3D1A6NKF1 404 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 C2CD2LO14523 706 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 P4HA2O15460 535 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 SKAP2O75563 359 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 ATP6V1B2P21281 511 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CTCFP49711 727 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CNGA2Q16280 664 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 EPHX4Q8IUS5 362 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 FOXN1O15353 648 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 PMPCBO75439 489 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 ZNF157P51786 506 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 SNRNP27Q8WVK2 155 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 HPDLQ96IR7 371 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 KLHL25Q9H0H3 589 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 ATP6V1HQ9UI12 483 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 LNPEPQ9UIQ6 1025 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CENPXA8MT69 81 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 PDE5AO76074 875 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 ZNF682O95780 498 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CLTBP09497 229 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 TARSP26639 723 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 TAF6P49848 677 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 ZNF284Q2VY69 593 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 DENND1BQ6P3S1 775 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 MTSS1LQ765P7 747 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 HPS3Q969F9 1004 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 RNFT2Q96EX2 444 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CCDC3Q9BQI4 270 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CARD9Q9H257 536 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 CLEC4MQ9H2X3 399 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 ENTPD7Q9NQZ7 604 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 SPATA2Q9UM82 520 aa12.73□□□□□ -0.37
CACNA1C-219ENST00000399649 PCDHB2Q9Y5E7 798 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms