RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 MYH7P12883 1935 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 GOLGA6L10A0A0M3HER8 536 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 A0A1W2PP55 124 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 CCDC169A6NNP5 214 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 GYPCP04921 128 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 SERPINB2P05120 415 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PDHBP11177 359 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PLCG1P19174 1290 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 KELP23276 732 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 GNL1P36915 607 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 DPP6P42658 865 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 MTIF2P46199 727 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 LSSP48449 732 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 CDK8P49336 464 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PEX5P50542 639 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ASIC1P78348 528 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZSCAN26Q16670 478 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PFKFB3Q16875 520 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 C4orf48Q5BLP8 95 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 SNX30Q5VWJ9 437 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 UBE2R2Q712K3 238 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 CCDC80Q76M96 950 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZNF765Q7L2R6 523 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 SLFN11Q7Z7L1 901 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 DENND1CQ8IV53 801 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 CCHCR1Q8TD31 782 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PIGOQ8TEQ8 1089 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZNF764Q96H86 408 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 TRIM47Q96LD4 638 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 NOL10Q9BSC4 688 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 EMILIN2Q9BXX0 1053 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 EHD4Q9H223 541 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 CD209Q9NNX6 404 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 TMEM160Q9NX00 188 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 SMARCAL1Q9NZC9 954 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 LRFN1Q9P244 771 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 HOOK1Q9UJC3 728 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 MTUS1Q9ULD2 1270 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PADI4Q9UM07 663 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PCDHA6Q9UN73 950 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PCDHA8Q9Y5H6 950 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 SNX8Q9Y5X2 465 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ANKRD31Q8N7Z5 1873 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 SMCO2A6NFE2 343 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PRLRP16471 622 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 TLX1P31314 330 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ALDH9A1P49189 494 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 AGFG1P52594 562 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 STARD6P59095 220 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ERVK-24P63145 666 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 COASYQ13057 564 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 MAPK7Q13164 816 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 GNPTABQ3T906 1256 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 NCAPH2Q6IBW4 605 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 C15orf52Q6ZUT6 534 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PRPF39Q86UA1 669 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 MLKLQ8NB16 471 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 NOC3LQ8WTT2 800 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 LRTOMTQ8WZ04 291 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ACSF2Q96CM8 615 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 DHTKD1Q96HY7 919 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 VPS50Q96JG6 964 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 LENG8Q96PV6 779 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 MAP7D2Q96T17 732 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PAIP1Q9H074 479 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 GLRX2Q9NS18 164 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 DUSP10Q9Y6W6 482 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 CEP350Q5VT06 3117 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 NT5C1B-RDH14C9J2C7 533 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 KHNYNO15037 678 aaKnown RBP6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 PLEKP08567 350 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 MMP10P09238 476 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 PAMP19021 973 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 HLA-DPA1P20036 260 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 ERVK-9P63128 1117 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 ATP2C1P98194 919 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 ACY1Q03154 408 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 STK4Q13043 487 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 R3HDM1Q15032 1099 aaKnown RBP6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 SV2CQ496J9 727 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 CTXN3Q4LDR2 81 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 FDX2Q6P4F2 183 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 IKBIPQ70UQ0 350 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 APTXQ7Z2E3 356 aaKnown RBP6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 LIX1LQ8IVB5 337 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 HERC6Q8IVU3 1022 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 GSPT2Q8IYD1 628 aaKnown RBP6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 C1orf127Q8N9H9 656 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 IQUBQ8NA54 791 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 CEP70Q8NHQ1 597 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 HDAC7Q8WUI4 952 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 BPIFA3Q9BQP9 254 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 PYM1Q9BRP8 204 aaKnown RBP6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 USP20Q9Y2K6 914 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 NPHP3-ACAD11A0A0J9YXS1 232 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 CTAGE9A4FU28 777 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 KCNJ18B7U540 433 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 CBX4O00257 560 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 SLC37A4O43826 429 aa6.56□□□□□ -1.36
TRAPPC13-202ENST00000399438 PIAS2O75928 621 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms