RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 JAG1P78504 1218 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 SLC25A3Q00325 362 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 DSG1Q02413 1049 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 FAAP100Q0VG06 881 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 SLC15A2Q16348 729 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 XKR9Q5GH70 373 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 LIN9Q5TKA1 542 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 RAPH1Q70E73 1250 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 SCUBE1Q8IWY4 988 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 FAM81AQ8TBF8 368 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 CFAP36Q96G28 342 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 WDR11Q9BZH6 1224 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 PREBQ9HCU5 417 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 LMCD1Q9NZU5 365 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 LNPEPQ9UIQ6 1025 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 GAKO14976 1311 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 CLUHO75153 1309 aa10.34□□□□□ -0.75
PTCHD4-202ENST00000398738 DENND3A2RUS2 1198 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 TRAFD1O14545 582 aaPredicted RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ABLIM1O14639 778 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ECE2O60344 883 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SERPINB6P35237 376 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 PEX6Q13608 980 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 UBAP2LQ14157 1087 aaKnown RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ABCB5Q2M3G0 1257 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SEZ6Q53EL9 994 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 TJAP1Q5JTD0 557 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 CPXCR1Q8N123 301 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 PPM1NQ8N819 430 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ABTB1Q969K4 478 aaPredicted RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SERAC1Q96JX3 654 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 TTC25Q96NG3 672 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 MCEEQ96PE7 176 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 PANX3Q96QZ0 392 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 RANBP17Q9H2T7 1088 aaKnown RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 DBNDD1Q9H9R9 158 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 CYLDQ9NQC7 956 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 FBXO28Q9NVF7 368 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 DDX18Q9NVP1 670 aaKnown RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ANGPTL2Q9UKU9 493 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ZHX2Q9Y6X8 837 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 RREB1Q92766 1687 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 LOC100653049A0A140TA62 436 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 HNRNPDLO14979 420 aaKnown RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 HNRNPRO43390 633 aaKnown RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 PFDN1O60925 122 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 KRT34O76011 436 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 INHBAP08476 426 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SLC1A1P43005 524 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ACOT2P49753 483 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 BTKQ06187 659 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 BMPR2Q13873 1038 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 BRDTQ58F21 947 aaPredicted RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 DCAF4Q8WV16 495 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 OPTNQ96CV9 577 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 NGLY1Q96IV0 654 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ECSITQ9BQ95 431 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 KCNK13Q9HB14 408 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 PICK1Q9NRD5 415 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SENP1Q9P0U3 644 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 PDP2Q9P2J9 529 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SLC4A7Q9Y6M7 1214 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 RPS6KA4O75676 772 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 TOP3BO95985 862 aaKnown RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 IL1R1P14778 569 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 CIITAP33076 1130 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SOX11P35716 441 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ATXN3P54252 364 aaPredicted RBP10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 AQP5P55064 265 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 MAMLD1Q13495 774 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 GRAMD1BQ3KR37 738 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 LIN52Q52LA3 116 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 FAXCQ5TGI0 409 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SATL1Q86VE3 508 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ARHGAP24Q8N264 748 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 ZFAND2BQ8WV99 257 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 RSAD2Q8WXG1 361 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 TEKT1Q969V4 418 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 IFT43Q96FT9 208 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 TRAPPC9Q96Q05 1148 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 SPATA16Q9BXB7 569 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 VCX3BQ9H321 246 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 VCX3AQ9NNX9 186 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 TMPRSS4Q9NRS4 437 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 PCSK1NQ9UHG2 260 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 LAMB1P07942 1786 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 PCNTO95613 3336 aa10.33□□□□□ -0.76
PTCHD4-202ENST00000398738 MYH11P35749 1972 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 PRR5-ARHGAP8B1AHC4 643 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ALOX15BO15296 676 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 RARBP10826 455 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 MYCLP12524 364 aaPredicted RBP10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ATP6V1B1P15313 513 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 PHBP35232 272 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 PSMC5P62195 406 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ARHGAP8P85298 464 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 ASPHQ12797 758 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 CDC16Q13042 620 aa10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 DYNC1I2Q13409 638 aaKnown RBP10.32□□□□□ -0.76
PTCHD4-202ENST00000398738 KBTBD12Q3ZCT8 623 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms