RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ABI2Q9NYB9 513 aaPredicted RBP27.02■■□□□ 1.92
U2AF1-203ENST00000398137 DLGAP2Q9P1A6 1054 aa27.02■■□□□ 1.92
U2AF1-203ENST00000398137 AJAP1Q9UKB5 411 aaPredicted RBP27.02■■□□□ 1.92
U2AF1-203ENST00000398137 SIK3Q9Y2K2 1263 aa27.02■■□□□ 1.92
U2AF1-203ENST00000398137 ECI2O75521 394 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 MICAL2O94851 1124 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 GJA1P17302 382 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 PTPN1P18031 435 aaKnown RBP27.01■■□□□ 1.91
U2AF1-203ENST00000398137 STARD6P59095 220 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 TMC8Q8IU68 726 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 TTC39CQ8N584 583 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 DTWD2Q8NBA8 298 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 MYLPFQ96A32 169 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 TNIP3Q96KP6 325 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 PCMTD1Q96MG8 357 aaPredicted RBP27.01■■□□□ 1.91
U2AF1-203ENST00000398137 ERGIC2Q96RQ1 377 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 NT5C1AQ9BXI3 368 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 FAM207AQ9NSI2 230 aaPredicted RBP27.01■■□□□ 1.91
U2AF1-203ENST00000398137 SLC27A5Q9Y2P5 690 aa27.01■■□□□ 1.91
U2AF1-203ENST00000398137 NCANO14594 1321 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 COL4A2P08572 1712 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 ACO1P21399 889 aaKnown RBP27■■□□□ 1.91
U2AF1-203ENST00000398137 MFAP3P55082 362 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 NFE2Q16621 373 aaPredicted RBP27■■□□□ 1.91
U2AF1-203ENST00000398137 ARHGAP44Q17R89 818 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 FAM78AQ5JUQ0 283 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 FAM171BQ6P995 826 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 PDZD4Q76G19 769 aaPredicted RBP27■■□□□ 1.91
U2AF1-203ENST00000398137 ZNF512Q96ME7 567 aaPredicted RBP27■■□□□ 1.91
U2AF1-203ENST00000398137 DDX23Q9BUQ8 820 aaKnown RBP27■■□□□ 1.91
U2AF1-203ENST00000398137 FOXQ1Q9C009 403 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 FAM124BQ9H5Z6 455 aaPredicted RBP27■■□□□ 1.91
U2AF1-203ENST00000398137 IFNKQ9P0W0 207 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 DNAJC12Q9UKB3 198 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 PCDHB4Q9Y5E5 795 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 FHOD1Q9Y613 1164 aa27■■□□□ 1.91
U2AF1-203ENST00000398137 SOAT2O75908 522 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 GLULP15104 373 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 UBASH3AP57075 661 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 KLHDC7AQ5VTJ3 777 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 IQCEQ6IPM2 695 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 MYCBPAPQ8TBZ2 947 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 ASB16Q96NS5 453 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 IRF2BPLQ9H1B7 796 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 GANQ9H2C0 597 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 PLCB1Q9NQ66 1216 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 PCDHB5Q9Y5E4 795 aa26.99■■□□□ 1.91
U2AF1-203ENST00000398137 SHISA7A6NL88 538 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 EPHB6O15197 1021 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 DCNP07585 359 aaKnown RBP26.98■■□□□ 1.91
U2AF1-203ENST00000398137 RAD23BP54727 409 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 CYP27A1Q02318 531 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 SMARCB1Q12824 385 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 MAPRE1Q15691 268 aaKnown RBP26.98■■□□□ 1.91
U2AF1-203ENST00000398137 TMEM270Q6UE05 265 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 ENOSF1Q7L5Y1 443 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 SPATA2LQ8IUW3 424 aaPredicted RBP26.98■■□□□ 1.91
U2AF1-203ENST00000398137 CRYBG2Q8N1P7 616 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 SLC4A11Q8NBS3 891 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 SHKBP1Q8TBC3 707 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 C2orf15Q8WU43 125 aaKnown RBP26.98■■□□□ 1.91
U2AF1-203ENST00000398137 ELSPBP1Q96BH3 223 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 PCED1BQ96HM7 432 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 FAM81BQ96LP2 452 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 FAM49BQ9NUQ9 324 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 MIA3Q5JRA6 1907 aa26.98■■□□□ 1.91
U2AF1-203ENST00000398137 PROB1E7EW31 1015 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 STK25O00506 426 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 ZNF197O14709 1029 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 MYL4P12829 197 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 KRT5P13647 590 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 CCDC130P13994 396 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 UCHL3P15374 230 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 RAPGEF1Q13905 1077 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 SLC44A4Q53GD3 710 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 CYP4A22Q5TCH4 519 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 C4orf50Q6ZRC1 276 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 ELMOD1Q8N336 334 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 C12orf29Q8N999 325 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 RBBP8NLQ8NC74 664 aaPredicted RBP26.97■■□□□ 1.91
U2AF1-203ENST00000398137 SPPL2BQ8TCT7 592 aa26.97■■□□□ 1.91
U2AF1-203ENST00000398137 SEPT5Q99719 369 aaPredicted RBP26.97■■□□□ 1.91
U2AF1-203ENST00000398137 ZNF334Q9HCZ1 680 aaPredicted RBP26.97■■□□□ 1.91
U2AF1-203ENST00000398137 CLDN5O00501 218 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 NOL4O94818 638 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 TRIM21P19474 475 aaKnown RBP26.96■■□□□ 1.91
U2AF1-203ENST00000398137 NBL1P41271 181 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 NR1I3Q14994 352 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 ANGPT1Q15389 498 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 TEAD2Q15562 447 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 MLF2Q15773 248 aaPredicted RBP26.96■■□□□ 1.91
U2AF1-203ENST00000398137 PJA1Q8NG27 643 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 NEK11Q8NG66 645 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 JAKMIP2Q96AA8 810 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 TMEM176AQ96HP8 235 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 B3GNT5Q9BYG0 378 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 ZNF518BQ9C0D4 1074 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 DNAI2Q9GZS0 605 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 ASAH2Q9NR71 780 aa26.96■■□□□ 1.91
U2AF1-203ENST00000398137 MTF2Q9Y483 593 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms