RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 AGAP1Q9UPQ3 857 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 DICER1Q9UPY3 1922 aaKnown RBP19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CENPUQ71F23 418 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 TRABD2AQ86V40 505 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FNIP1Q8TF40 1166 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 TTC25Q96NG3 672 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SHOC2Q9UQ13 582 aa19.23■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ALOX15BO15296 676 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 KRT15P19012 456 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 GPD2P43304 727 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 WDR4P57081 412 aaKnown RBP19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SLC8A3P57103 927 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MSS51Q4VC12 460 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FAM102AQ5T9C2 384 aaPredicted RBP19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 BBS12Q6ZW61 710 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ILDR2Q71H61 639 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RFX6Q8HWS3 928 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 UNC45BQ8IWX7 931 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 C4orf33Q8N1A6 199 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CPT1BQ92523 772 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 HPDLQ96IR7 371 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RSRC1Q96IZ7 334 aaKnown RBP19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PIWIL1Q96J94 861 aaKnown RBP19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 HGSO14964 777 aaPredicted RBP19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 OSBPP22059 807 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 HIF1AQ16665 826 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CCDC142Q17RM4 750 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ZC3H12AQ5D1E8 599 aaKnown RBP19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FNBP1LQ5T0N5 605 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RSAD2Q8WXG1 361 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MROH8Q9H579 483 aa19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FARP1Q9Y4F1 1045 aaPredicted RBP19.22■□□□□ 0.67
CHRFAM7A-202ENST00000397827 TCRBV7S3A2A0A539 114 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FAM47DPA6NHR8 397 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 GRAP2O75791 330 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MCF2P10911 925 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FOXN2P32314 431 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RPL22P35268 128 aaKnown RBP19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MMRN1Q13201 1228 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PPIL2Q13356 520 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ZNF268Q14587 947 aaPredicted RBP19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RBBP5Q15291 538 aaKnown RBP19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PLCD4Q9BRC7 762 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ADPGKQ9BRR6 497 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 NFKBIZQ9BYH8 718 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RNF181Q9P0P0 153 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 WDR35Q9P2L0 1181 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 USP18Q9UMW8 372 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SLC12A4Q9UP95 1085 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ACTL7BQ9Y614 415 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RNF8O76064 485 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SSTR1P30872 391 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 GPX6P59796 221 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CGB2Q6NT52 195 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FAM47EQ6ZV65 393 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 RIBC1Q8N443 379 aaPredicted RBP19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 C12orf29Q8N999 325 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 FAM71DQ8N9W8 422 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MAGEC3Q8TD91 643 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 AFG1LQ8WV93 481 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MAGEB18Q96M61 343 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 PEBP4Q96S96 227 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 UBOX5O94941 541 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 NDST1P52848 882 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 EFTUD2Q15029 972 aaKnown RBP eCLIP19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 CDO1Q16878 200 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 ACCSLQ4AC99 568 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SYCP2LQ5T4T6 812 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SPATA21Q7Z572 469 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 MCRS1Q96EZ8 462 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 TRABDQ9H4I3 376 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 EFR3BQ9Y2G0 817 aa19.21■□□□□ 0.67
CHRFAM7A-202ENST00000397827 SBF1O95248 1867 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CLUHO75153 1309 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 DNAJC8O75937 253 aaPredicted RBP19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SUN1O94901 812 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SNUPNO95149 360 aaKnown RBP19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CYP3A5P20815 502 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SLC8A1P32418 973 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 XRCC4Q13426 336 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TMEM132DQ14C87 1099 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 C15orf59Q2T9L4 293 aaPredicted RBP19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ZNF484Q5JVG2 852 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TRNP1Q6NT89 227 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 NPNTQ6UXI9 565 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PPP1R21Q6ZMI0 780 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 NLRP7Q8WX94 980 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CXCL16Q9H2A7 254 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 A0A1W2PPM1 405 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TRUB2O95900 331 aaKnown RBP19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TAC1P20366 129 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 EIF3EP60228 445 aaKnown RBP19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TNFAIP2Q03169 654 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TAZQ16635 292 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TAPT1Q6NXT6 567 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PPIL6Q8IXY8 311 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MAB21L3Q8N8X9 362 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TTC13Q8NBP0 860 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms