RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PAPSS1O43252 624 aaPredicted RBP28.98■■■□□ 2.23
CPNE1-203ENST00000397442 SLC8A3P57103 927 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 C9orf50Q5SZB4 431 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 MEI1Q5TIA1 1274 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 FAM183BPQ6ZVS7 135 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 PIK3R5Q8WYR1 880 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 KCTD13Q8WZ19 329 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 PIWIL1Q96J94 861 aaKnown RBP28.98■■■□□ 2.23
CPNE1-203ENST00000397442 MIS12Q9H081 205 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 SIGLEC16A6NMB1 481 aa28.97■■■□□ 2.23
CPNE1-203ENST00000397442 GOLGA8SH3BPF8 625 aa28.97■■■□□ 2.23
CPNE1-203ENST00000397442 MAGEA10P43363 369 aaPredicted RBP28.97■■■□□ 2.23
CPNE1-203ENST00000397442 C4orf50Q6ZRC1 276 aa28.97■■■□□ 2.23
CPNE1-203ENST00000397442 DDX53Q86TM3 631 aaKnown RBP28.97■■■□□ 2.23
CPNE1-203ENST00000397442 NT5DC3Q86UY8 548 aa28.97■■■□□ 2.23
CPNE1-203ENST00000397442 SYCE1Q8N0S2 351 aa28.97■■■□□ 2.23
CPNE1-203ENST00000397442 NR2E3Q9Y5X4 410 aa28.97■■■□□ 2.23
CPNE1-203ENST00000397442 HHLA1C9JL84 531 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 NCK2O43639 380 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 TLL1O43897 1013 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 PPM1AP35813 382 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 RABGGTBP53611 331 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 AMPD2Q01433 879 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 MESDQ14696 234 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 PAPD7Q5XG87 772 aaKnown RBP28.96■■■□□ 2.23
CPNE1-203ENST00000397442 OLFML1Q6UWY5 402 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 SPATA2LQ8IUW3 424 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-203ENST00000397442 SCUBE3Q8IX30 993 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 RIN2Q8WYP3 895 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-203ENST00000397442 MCEEQ96PE7 176 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 HERC2P3Q9BVR0 1158 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 OXCT2Q9BYC2 517 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-203ENST00000397442 AAASQ9NRG9 546 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 MTRRQ9UBK8 725 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 HYOU1Q9Y4L1 999 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 ALG6Q9Y672 507 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 ACADSBP45954 432 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 NFE2Q16621 373 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-203ENST00000397442 CFAP221Q4G0U5 840 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 OR6B2Q6IFH4 312 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 SELENOOQ9BVL4 669 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 UBXN6Q9BZV1 441 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 PACSIN2Q9UNF0 486 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-203ENST00000397442 PCDHB12Q9Y5F1 795 aa28.96■■■□□ 2.23
CPNE1-203ENST00000397442 KRT3P12035 628 aa28.95■■■□□ 2.22
CPNE1-203ENST00000397442 SNX16P57768 344 aa28.95■■■□□ 2.22
CPNE1-203ENST00000397442 DSG1Q02413 1049 aa28.95■■■□□ 2.22
CPNE1-203ENST00000397442 TAP1Q03518 808 aa28.95■■■□□ 2.22
CPNE1-203ENST00000397442 PTPROQ16827 1216 aa28.95■■■□□ 2.22
CPNE1-203ENST00000397442 CPNE8Q86YQ8 564 aa28.95■■■□□ 2.22
CPNE1-203ENST00000397442 JOSD2Q8TAC2 188 aa28.95■■■□□ 2.22
CPNE1-203ENST00000397442 METTL5Q9NRN9 209 aaKnown RBP28.95■■■□□ 2.22
CPNE1-203ENST00000397442 BACE2Q9Y5Z0 518 aa28.95■■■□□ 2.22
CPNE1-203ENST00000397442 TMEM110-MUSTN1A8MSY1 372 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 MYO1FO00160 1098 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 LCP1P13796 627 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 CYP2F1P24903 491 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 RFC1P35251 1148 aaPredicted RBP28.94■■■□□ 2.22
CPNE1-203ENST00000397442 OGDHQ02218 1023 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 ZNF252P-AS1Q0IIN9 211 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 GPR17Q13304 367 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 PSMD5Q16401 504 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 RAB41Q5JT25 222 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 FAM102AQ5T9C2 384 aaPredicted RBP28.94■■■□□ 2.22
CPNE1-203ENST00000397442 SLC8B1Q6J4K2 584 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 GPRIN1Q7Z2K8 1008 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 PEX26Q7Z412 305 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 CLEC4CQ8WTT0 213 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 KHSRPQ92945 711 aaKnown RBP eCLIP28.94■■■□□ 2.228e-8■■■□□ 15.7
CPNE1-203ENST00000397442 FUBP3Q96I24 572 aaKnown RBP eCLIP28.94■■■□□ 2.22
CPNE1-203ENST00000397442 DMAP1Q9NPF5 467 aaPredicted RBP28.94■■■□□ 2.22
CPNE1-203ENST00000397442 PATJQ8NI35 1801 aa28.94■■■□□ 2.22
CPNE1-203ENST00000397442 ADAM12O43184 909 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 VNN2O95498 520 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 SLC6A3Q01959 620 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 ADIGQ0VDE8 80 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 DCUN1D2Q6PH85 259 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 ZDHHC17Q8IUH5 632 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 FBXO22Q8NEZ5 403 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 ABI2Q9NYB9 513 aaPredicted RBP28.93■■■□□ 2.22
CPNE1-203ENST00000397442 TMEM59LQ9UK28 342 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 CDY1Q9Y6F8 540 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 FGF18O76093 207 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 URI1O94763 535 aaPredicted RBP28.93■■■□□ 2.22
CPNE1-203ENST00000397442 COMTP21964 271 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 GLUD2P49448 558 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 ADCY1Q08828 1119 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 SHHQ15465 462 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 KIAA1841Q6NSI8 718 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 PGLYRP2Q96PD5 576 aa28.93■■■□□ 2.22
CPNE1-203ENST00000397442 CPB1P15086 417 aa28.92■■■□□ 2.22
CPNE1-203ENST00000397442 RPL17P18621 184 aaKnown RBP28.92■■■□□ 2.22
CPNE1-203ENST00000397442 ARPP19P56211 112 aa28.92■■■□□ 2.22
CPNE1-203ENST00000397442 TAF5Q15542 800 aa28.92■■■□□ 2.22
CPNE1-203ENST00000397442 VPS52Q8N1B4 723 aa28.92■■■□□ 2.22
CPNE1-203ENST00000397442 ATAD1Q8NBU5 361 aa28.92■■■□□ 2.22
CPNE1-203ENST00000397442 HES6Q96HZ4 224 aa28.92■■■□□ 2.22
CPNE1-203ENST00000397442 AMFRQ9UKV5 643 aa28.92■■■□□ 2.22
CPNE1-203ENST00000397442 SNX12Q9UMY4 172 aa28.92■■■□□ 2.22
CPNE1-203ENST00000397442 PCDHB5Q9Y5E4 795 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms