RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZMIZ2Q8NF64 920 aa24.95■■□□□ 1.58
TSPAN4-203ENST00000397397 HDAC7Q8WUI4 952 aa24.95■■□□□ 1.58
TSPAN4-203ENST00000397397 C8orf48Q96LL4 319 aa24.95■■□□□ 1.58
TSPAN4-203ENST00000397397 DEF6Q9H4E7 631 aa24.95■■□□□ 1.58
TSPAN4-203ENST00000397397 SSU72P8A0A1W2PR75 194 aa24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 TULP2O00295 520 aa24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 XPO1O14980 1071 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 ALDH1A3P47895 512 aa24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 RBM10P98175 930 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 MAPK8IP2Q13387 824 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 SDHAF4Q5VUM1 108 aa24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 ELMSAN1Q6PJG2 1045 aa24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 CYP26C1Q6V0L0 522 aa24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 C1orf131Q8NDD1 294 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 OLIG1Q8TAK6 271 aa24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 NHEJ1Q9H9Q4 299 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-203ENST00000397397 PRRC2BQ5JSZ5 2229 aaKnown RBP24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 SPDYE4A6NLX3 237 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 DDX3XO00571 662 aaKnown RBP eCLIP24.93■■□□□ 1.581e-6■■■■□ 19.5
TSPAN4-203ENST00000397397 LSM8O95777 96 aaKnown RBP24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 FECHP22830 423 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 TWF1Q12792 350 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 CLEC16AQ2KHT3 1053 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 PPM1LQ5SGD2 360 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 NAA35Q5VZE5 725 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 WDTC1Q8N5D0 677 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 EFHBQ8N7U6 833 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 VN1R2Q8NFZ6 395 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 SLC35F5Q8WV83 523 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 CASP10Q92851 521 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 CCDC42Q96M95 316 aa24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 BAG1Q99933 345 aaPredicted RBP24.93■■□□□ 1.58
TSPAN4-203ENST00000397397 FAM170AA1A519 330 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 LRG1P02750 347 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 CYP1A1P04798 512 aaPredicted RBP24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 ATF6P18850 670 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 CDH5P33151 784 aaPredicted RBP24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 PLA2G4AP47712 749 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 RGS7P49802 495 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 NOMO3P69849 1222 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 PLD1Q13393 1074 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 KCNC3Q14003 757 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 RTL10Q7L3V2 364 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 PIGZQ86VD9 579 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 TMTC1Q8IUR5 882 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 GPR152Q8TDT2 470 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 GIPC2Q8TF65 315 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 CPA5Q8WXQ8 436 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 PPM1EQ8WY54 764 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 NOX5Q96PH1 765 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 UBXN6Q9BZV1 441 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 ADAMTS1Q9UHI8 967 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 CYTH4Q9UIA0 394 aa24.92■■□□□ 1.58
TSPAN4-203ENST00000397397 PATJQ8NI35 1801 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 LINC01565O15544 149 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 AKR1B10O60218 316 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 ZMYND10O75800 440 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 EPHB3P54753 998 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 PMF1Q6P1K2 205 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 SLC30A5Q8TAD4 765 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 SPATA17Q96L03 361 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 PPP1R9BQ96SB3 815 aa24.91■■□□□ 1.58
TSPAN4-203ENST00000397397 HHLA1C9JL84 531 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 SRGAP2BP0DMP2 458 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 UNGP13051 313 aaPredicted RBP24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 PDCLQ13371 301 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 VEPH1Q14D04 833 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 LRRC8AQ8IWT6 810 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 STKLD1Q8NE28 680 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 STK32AQ8WU08 396 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 PNPLA8Q9NP80 782 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 ST7Q9NRC1 585 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 DZANK1Q9NVP4 752 aa24.9■■□□□ 1.58
TSPAN4-203ENST00000397397 A0A087X0T9 212 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 TMCO5BA8MYB1 307 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 RFPL2O75678 378 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 GLP2RO95838 553 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 FAM228BP0C875 321 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 KIF11P52732 1056 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 ADAM15Q13444 863 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 CCDC85BQ15834 202 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 ASTE1Q2TB18 679 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 GPRIN1Q7Z2K8 1008 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 TMEM139Q8IV31 216 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 NUP93Q8N1F7 819 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 PPP1R13BQ96KQ4 1090 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 HSFY1Q96LI6 401 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 CEP295NLQ96MC4 621 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 LRRC4Q9HBW1 653 aa24.89■■□□□ 1.58
TSPAN4-203ENST00000397397 SOWAHDA6NJG2 315 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 SLC38A8A6NNN8 435 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 CCL16O15467 120 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 NSFP46459 744 aaKnown RBP24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 CENPCQ03188 943 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 GFPT1Q06210 699 aaPredicted RBP24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 ACAD10Q6JQN1 1059 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 TMEM184AQ6ZMB5 413 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 DENND5BQ6ZUT9 1274 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 ERICH1Q86X53 443 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 CCDC112Q8NEF3 446 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms