RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PPIL2Q13356 520 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 RCN1Q15293 331 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 LDLRAD1Q5T700 205 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 ANKRD22Q5VYY1 191 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 TMEM154Q6P9G4 183 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 VSIG10LQ86VR7 867 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 ZFAND2BQ8WV99 257 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 TAS2R1Q9NYW7 299 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 DCTN4Q9UJW0 460 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 COL11A1P12107 1806 aaPredicted RBP13.95□□□□□ -0.18
TRIM40-207ENST00000396581 WDR90Q96KV7 1748 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 CFAP69A5D8W1 941 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 ANKRD33BA6NCL7 494 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 A8MXQ7 604 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 GYG2O15488 501 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 DKC1O60832 514 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 RARBP10826 455 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 CDH5P33151 784 aaPredicted RBP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 RAP1GDS1P52306 607 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 GAD2Q05329 585 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 OVGP1Q12889 678 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 TTLL12Q14166 644 aaPredicted RBP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 KPNB1Q14974 876 aaKnown RBP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 SEPT7Q16181 437 aaKnown RBP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 SLC30A9Q6PML9 568 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 LRRC74BQ6ZQY2 392 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 FBXO36Q8NEA4 188 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 BICD1Q96G01 975 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 ZNF518BQ9C0D4 1074 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 VCXQ9H320 206 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 ZNF212Q9UDV6 495 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 KCNG1Q9UIX4 513 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 NUB1Q9Y5A7 615 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 UNCXA6NJT0 531 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 TBX10O75333 385 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 KRT36O76013 467 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 GSTA2P09210 222 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 SKIP12755 728 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 SERPINB3P29508 390 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 LIG4P49917 911 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 GDF10P55107 478 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 MXRA7P84157 204 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 AP1B1Q10567 949 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 THEMIS2Q5TEJ8 643 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 ARHGEF16Q5VV41 709 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 RINLQ6ZS11 566 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 LRRC6Q86X45 466 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 RHPN2Q8IUC4 686 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 MFN1Q8IWA4 741 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 GALNT15Q8N3T1 639 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 TTC13Q8NBP0 860 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 CHST13Q8NET6 341 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 NSUN6Q8TEA1 469 aaKnown RBP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 SCG3Q8WXD2 468 aaKnown RBP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 GATA6Q92908 595 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 ATP6V0A1Q93050 837 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 APOPT1Q96IL0 206 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 MCEEQ96PE7 176 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 TSC22D3Q99576 134 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 CGRRF1Q99675 332 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 TMEM120AQ9BXJ8 343 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 ADAM33Q9BZ11 813 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 HAPLN2Q9GZV7 340 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 ARHGEF4Q9NR80 690 aa13.94□□□□□ -0.18
TRIM40-207ENST00000396581 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 AGO2Q9UKV8 859 aaKnown RBP13.94□□□□□ -0.18
TRIM40-207ENST00000396581 WDR81Q562E7 1941 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 CNTNAP2Q9UHC6 1331 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 SIP14410 1827 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 A0A0G2JND7 137 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 WDR91A4D1P6 747 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 EIF4E1BA6NMX2 242 aaKnown RBP13.93□□□□□ -0.18
TRIM40-207ENST00000396581 F8W8V4 182 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 MAGEC1O60732 1142 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 IFNB1P01574 187 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 NR3C2P08235 984 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 RPL22P35268 128 aaKnown RBP13.93□□□□□ -0.18
TRIM40-207ENST00000396581 PAPOLAP51003 745 aaKnown RBP13.93□□□□□ -0.18
TRIM40-207ENST00000396581 ROR2Q01974 943 aaKnown RBP13.93□□□□□ -0.18
TRIM40-207ENST00000396581 CCDC6Q16204 474 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 CWF19L1Q69YN2 538 aaKnown RBP13.93□□□□□ -0.18
TRIM40-207ENST00000396581 DNAJC24Q6P3W2 148 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 BBS12Q6ZW61 710 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 TRMT1LQ7Z2T5 733 aaKnown RBP13.93□□□□□ -0.18
TRIM40-207ENST00000396581 ACTL9Q8TC94 416 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 WDR60Q8WVS4 1066 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 TEKT4Q8WW24 435 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 PRR11Q96HE9 360 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-207ENST00000396581 TRAPPC9Q96Q05 1148 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 GABBR1Q9UBS5 961 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 TCEAL9Q9UHQ7 104 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 STRIP2Q9ULQ0 834 aa13.93□□□□□ -0.18
TRIM40-207ENST00000396581 IQANK1A0A1B0GTG1 560 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 GOLGA8SH3BPF8 625 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 GOLGA8MH3BSY2 632 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 CAPN9O14815 690 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 MAFGO15525 162 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 MAP3K13O43283 966 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms