RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MYCBPAPQ8TBZ2 947 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 MIEF2Q96C03 454 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 CEP44Q9C0F1 390 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 TRAF2Q12933 501 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 SV2CQ496J9 727 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 ARMC6Q6NXE6 501 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 CLEC4GQ6UXB4 293 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 ADSSL1Q8N142 457 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 WDR36Q8NI36 951 aaKnown RBP14.47□□□□□ -0.09
COL4A3-202ENST00000396578 RGS18Q9NS28 235 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 EDRF1Q3B7T1 1238 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 ZFRQ96KR1 1074 aaKnown RBP14.47□□□□□ -0.09
COL4A3-202ENST00000396578 ALG6Q9Y672 507 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 STON1Q9Y6Q2 735 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 SKAP2O75563 359 aaPredicted RBP14.47□□□□□ -0.09
COL4A3-202ENST00000396578 IL6P05231 212 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 TMEM253P0C7T8 217 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 OVGP1Q12889 678 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 CYP4Z2PQ8N1L4 340 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 TTLL6Q8N841 843 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 C2orf69Q8N8R5 385 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 ZFYVE16Q7Z3T8 1539 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 PDE9AO76083 593 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 GYPCP04921 128 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 HARS2P49590 506 aaKnown RBP14.47□□□□□ -0.09
COL4A3-202ENST00000396578 RASA2Q15283 850 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 TPCN2Q8NHX9 752 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 ANKS1AQ92625 1134 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 RXFP1Q9HBX9 757 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 SLC38A7Q9NVC3 462 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 MINPP1Q9UNW1 487 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 PDS5AQ29RF7 1337 aaKnown RBP14.47□□□□□ -0.09
COL4A3-202ENST00000396578 ATMINO43313 823 aaPredicted RBP14.47□□□□□ -0.09
COL4A3-202ENST00000396578 TIMM44O43615 452 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 HMBSP08397 361 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 RBP3P10745 1247 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 PGS1Q32NB8 556 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 MIER2Q8N344 545 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 MPP4Q96JB8 637 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 METTL5Q9NRN9 209 aaKnown RBP14.47□□□□□ -0.09
COL4A3-202ENST00000396578 RAD18Q9NS91 495 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 SPACA6W5XKT8 324 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 SPHKAPQ2M3C7 1700 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 USP6P35125 1406 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 KCNJ1P48048 391 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 STAT5BP51692 787 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 KLHL12Q53G59 568 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 EFHC1Q5JVL4 640 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 ZNF544Q6NX49 715 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 AHI1Q8N157 1196 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 ZNF513Q8N8E2 541 aaPredicted RBP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 FAM49BQ9NUQ9 324 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 MED26O95402 600 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 MTM1Q13496 603 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 TFDP3Q5H9I0 405 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 KCNB2Q92953 911 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 ATAD3AQ9NVI7 634 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 COMMD8Q9NX08 183 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 MAPK7Q13164 816 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 GOLGA7BQ2TAP0 167 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 TRMT5Q32P41 509 aaKnown RBP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 IKBIPQ70UQ0 350 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 MAGED4Q96JG8 741 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 ZNF512Q96ME7 567 aaPredicted RBP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 CYP39A1Q9NYL5 469 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 TAGLN3Q9UI15 199 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 CRLS1Q9UJA2 301 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 SH3BP1Q9Y3L3 701 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 SUPT7LO94864 414 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 SNUPNO95149 360 aaKnown RBP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 CNTFP26441 200 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 TC2NQ8N9U0 490 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 OR6J1Q8NGC5 347 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 NARS2Q96I59 477 aaKnown RBP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 KCTD14Q9BQ13 255 aaPredicted RBP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 CINPQ9BW66 212 aaPredicted RBP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 ERAP1Q9NZ08 941 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 TM9SF1O15321 606 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 CCT8P50990 548 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 ATP1A4Q13733 1029 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 ERAP2Q6P179 960 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 ATG16L2Q8NAA4 619 aa14.46□□□□□ -0.09
COL4A3-202ENST00000396578 UBE2OQ9C0C9 1292 aaKnown RBP14.46□□□□□ -0.09
COL4A3-202ENST00000396578 PNMA8CA0A1B0GUJ8 204 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 NR5A2O00482 541 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 SMNDC1O75940 238 aaKnown RBP eCLIP14.46□□□□□ -0.1
COL4A3-202ENST00000396578 ZNF682O95780 498 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 IFNA14P01570 189 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 IRF1P10914 325 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 KCNMA1Q12791 1236 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 GPAT2Q6NUI2 795 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 IZUMO2Q6UXV1 221 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 C6orf62Q9GZU0 229 aaPredicted RBP14.46□□□□□ -0.1
COL4A3-202ENST00000396578 POLRMTO00411 1230 aaKnown RBP14.46□□□□□ -0.1
COL4A3-202ENST00000396578 MYBP10242 640 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 NCAM1P13591 858 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 EPS8L3Q8TE67 593 aaKnown RBP14.46□□□□□ -0.1
COL4A3-202ENST00000396578 CAMKK2Q96RR4 588 aa14.46□□□□□ -0.1
COL4A3-202ENST00000396578 TDRD3Q9H7E2 651 aaKnown RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms