RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ZBED8Q8IZ13 594 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 PPP1R13LQ8WUF5 828 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 DYDC1Q8WWB3 177 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 ZMAT2Q96NC0 199 aaKnown RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 TTC25Q96NG3 672 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 GOLGA6L7A0A1B0GV03 622 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 C2CD4BA6NLJ0 364 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 STRNO43815 780 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 RNF8O76064 485 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 NPTXRO95502 500 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 HOXA11P31270 313 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 CTCFP49711 727 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 TMEM62Q0P6H9 643 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 PDIA2Q13087 525 aaKnown RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 C15orf59Q2T9L4 293 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 DUSP28Q4G0W2 176 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 LACTB2Q53H82 288 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 GPR142Q7Z601 462 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 GDAP1Q8TB36 358 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 CKAP2Q8WWK9 683 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 RXFP2Q8WXD0 754 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 MAML3Q96JK9 1138 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 NT5C1AQ9BXI3 368 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 FRMD8P1Q9BZ68 369 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 SETD4Q9NVD3 440 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 ASNSD1Q9NWL6 643 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 TCP11X1B4DZS4 312 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 ENDOD1O94919 500 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 GPD1P21695 349 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 OR6B2Q6IFH4 312 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 ZNF410Q86VK4 478 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 NT5DC4Q86YG4 428 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 RIBC1Q8N443 379 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 NAT8LQ8N9F0 302 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 MRPL45Q9BRJ2 306 aaKnown RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 GBA2Q9HCG7 927 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 ACTL7BQ9Y614 415 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 PCK1P35558 622 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 ITIH4Q14624 930 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 GOLGA7BQ2TAP0 167 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 MSS51Q4VC12 460 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 OR6J1Q8NGC5 347 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 CALN1Q9BXU9 219 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 ADAMTS10Q9H324 1103 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 CDHR5Q9HBB8 845 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 SNTG2Q9NY99 539 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 SLC45A1Q9Y2W3 748 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 SCN4AP35499 1836 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 TCRBV7S3A2A0A539 114 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 APOC4-APOC2K7ER74 178 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 GRAP2O75791 330 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 OAS1P00973 400 aaKnown RBP17.35■□□□□ 0.37
TRIM39-205ENST00000396551 APOC2P02655 101 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 RGS7P49802 495 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 NRLP54845 237 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 GPX6P59796 221 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 FNBP1LQ5T0N5 605 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 PPP1R26Q5T8A7 1209 aaPredicted RBP17.35■□□□□ 0.37
TRIM39-205ENST00000396551 NPNTQ6UXI9 565 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 CENPUQ71F23 418 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 DPP9Q86TI2 863 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 TDRPQ86YL5 185 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 ANKMY2Q8IV38 441 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 TAB3Q8N5C8 712 aaPredicted RBP17.35■□□□□ 0.37
TRIM39-205ENST00000396551 WDR83Q9BRX9 315 aaKnown RBP17.35■□□□□ 0.37
TRIM39-205ENST00000396551 CNPY3Q9BT09 278 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 VPS37BQ9H9H4 285 aa17.35■□□□□ 0.37
TRIM39-205ENST00000396551 RASA4BC9J798 803 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 POC1B-GALNT4F8VUJ3 575 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 RASA4O43374 803 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 GRB14Q14449 540 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 TRABD2AQ86V40 505 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 TAX1BP1Q86VP1 789 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 TTC30AQ86WT1 665 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 PPIL6Q8IXY8 311 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 EIF2AQ9BY44 585 aaKnown RBP17.34■□□□□ 0.37
TRIM39-205ENST00000396551 ACTR5Q9H9F9 607 aaPredicted RBP17.34■□□□□ 0.37
TRIM39-205ENST00000396551 FGFR1OP2Q9NVK5 253 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 SAMD15Q9P1V8 674 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 CLUHO75153 1309 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 PDCD11Q14690 1871 aaKnown RBP17.34■□□□□ 0.37
TRIM39-205ENST00000396551 CCT8L1PA6NM43 557 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 SNX3O60493 162 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 EIF3EP60228 445 aaKnown RBP17.34■□□□□ 0.37
TRIM39-205ENST00000396551 PKDCCQ504Y2 493 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 RSAD2Q8WXG1 361 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 KDM4CQ9H3R0 1056 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 TUBGCP4Q9UGJ1 667 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 KIAA1257Q9ULG3 409 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 GINS2Q9Y248 185 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 PDGFRAP16234 1089 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 ACVR2BQ13705 512 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 HIF1AQ16665 826 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 PMF1Q6P1K2 205 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 PCGF5Q86SE9 256 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 NPLOC4Q8TAT6 608 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 NSRP1Q9H0G5 558 aaKnown RBP17.34■□□□□ 0.37
TRIM39-205ENST00000396551 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRIM39-205ENST00000396551 RNF19AQ9NV58 838 aa17.34■□□□□ 0.37
TRIM39-205ENST00000396551 GJD2Q9UKL4 321 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms