RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 PSMC1P62191 440 aaKnown RBP15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 CCNG2Q16589 344 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 ARHGAP17Q68EM7 881 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 Q7L0L9 218 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 XYLT1Q86Y38 959 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 CCDC105Q8IYK2 499 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 CPXM1Q96SM3 734 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 FMO2Q99518 471 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 OSBPL8Q9BZF1 889 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 SYNCQ9H7C4 482 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 ZDHHC18Q9NUE0 388 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 TUBGCP4Q9UGJ1 667 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 M0QYV0 167 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 RNF40O75150 1001 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 BAIAP3O94812 1187 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 KRT7P08729 469 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 LRPAP1P30533 357 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 LPIN1Q14693 890 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 PKDCCQ504Y2 493 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 FBXO47Q5MNV8 452 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 DRICH1Q6PGQ1 229 aaPredicted RBP15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 DPH6Q7L8W6 267 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 FAM228AQ86W67 206 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 DDX42Q86XP3 938 aaKnown RBP eCLIP15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 HACE1Q8IYU2 909 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 TRIM51Q9BSJ1 452 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 PBX4Q9BYU1 374 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 IPPQ9Y573 584 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 SNX9Q9Y5X1 595 aa15.17■□□□□ 0.02
RTFDC1-203ENST00000395881 ABHD14A-ACY1A0A1B0GW23 586 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 PPFIA2O75334 1257 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 GAS8O95995 478 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 ERBB2P04626 1255 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 GHRP10912 638 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 RALAP11233 206 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 ATP2A2P16615 1042 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 RFC1P35251 1148 aaPredicted RBP15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 RABGGTBP53611 331 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 WDR5P61964 334 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 OGDHQ02218 1023 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 LMNB2Q03252 620 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 NFX1Q12986 1120 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 IKBKEQ14164 716 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 HADHQ16836 314 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 SV2CQ496J9 727 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 CYP4A22Q5TCH4 519 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 TMC3Q7Z5M5 1100 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 ZDHHC17Q8IUH5 632 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 CCDC50Q8IVM0 306 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 CRYBG2Q8N1P7 616 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 SMG8Q8ND04 991 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 ATL2Q8NHH9 583 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 SEPT8Q92599 483 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 ZIM3Q96PE6 472 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 SLITRK1Q96PX8 696 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 TXLNGYQ9BZA5 131 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 DCLK3Q9C098 648 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 NEUROG2Q9H2A3 272 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 PLEKHA4Q9H4M7 779 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 CYLDQ9NQC7 956 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 WHRNQ9P202 907 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 VPS18Q9P253 973 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 ADAM21Q9UKJ8 722 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 TSPAN16Q9UKR8 245 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 USTQ9Y2C2 406 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 FAN1Q9Y2M0 1017 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 HES2Q9Y543 173 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 MYO9BQ13459 2157 aa15.16■□□□□ 0.02
RTFDC1-203ENST00000395881 KPNA7A9QM74 516 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 F8VP50 259 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 TJP3O95049 919 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 SLC34A2O95436 690 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 DNAJB2P25686 324 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 PSMA2P25787 234 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 PCK1P35558 622 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 SCNN1AP37088 669 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 TAF6P49848 677 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 DEFB103AP81534 67 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 PTK6Q13882 451 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.15■□□□□ 0.022e-19■■■■■ 46.5
RTFDC1-203ENST00000395881 DEFB123Q8N688 67 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 PIK3R5Q8WYR1 880 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 C18orf25Q96B23 403 aaPredicted RBP15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 TRAIPQ9BWF2 469 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 SLC4A5Q9BY07 1137 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 FRMD8P1Q9BZ68 369 aaPredicted RBP15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 TSPYL1Q9H0U9 437 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 DPH5Q9H2P9 285 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 TTYH1Q9H313 450 aaPredicted RBP15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 AGO3Q9H9G7 860 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 SLC38A7Q9NVC3 462 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 GRHL1Q9NZI5 618 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 MTRF1LQ9UGC7 380 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 GJB6O95452 261 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 MYOGP15173 224 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 AKAP5P24588 427 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 HSD17B3P37058 310 aa15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 SSR1P43307 286 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-203ENST00000395881 CAV1Q03135 178 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms