RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TRIM21P19474 475 aaKnown RBP17.54■□□□□ 0.4
CXCL1-201ENST00000395761 MAP3K7CLP57077 242 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 TPM4P67936 248 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 CYP4F8P98187 520 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 ARHGAP17Q68EM7 881 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 PARM1Q6UWI2 310 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 CLEC20AQ6ZU45 233 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 TFAP2BQ92481 460 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 TRMT2BQ96GJ1 504 aaKnown RBP17.54■□□□□ 0.4
CXCL1-201ENST00000395761 CEP295NLQ96MC4 621 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 ZSWIM1Q9BR11 485 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 RPP25Q9BUL9 199 aaKnown RBP17.54■□□□□ 0.4
CXCL1-201ENST00000395761 DNAI2Q9GZS0 605 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 CSNK1G1Q9HCP0 422 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 DMAP1Q9NPF5 467 aaPredicted RBP17.54■□□□□ 0.4
CXCL1-201ENST00000395761 GDE1Q9NZC3 331 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 ANHXE9PGG2 379 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 TNFRSF10BO14763 440 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 FGF19O95750 216 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 FAM200BP0CF97 657 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 CD19P15391 556 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 CDC25CP30307 473 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 KLK7P49862 253 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 ZNF132P52740 706 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 MFAP3P55082 362 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 HTR4Q13639 388 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 ARHGAP44Q17R89 818 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 FAM78AQ5JUQ0 283 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 GPIHBP1Q8IV16 184 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 NUP93Q8N1F7 819 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 RBBP8NLQ8NC74 664 aaPredicted RBP17.53■□□□□ 0.4
CXCL1-201ENST00000395761 RNF214Q8ND24 703 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 SCAMP5Q8TAC9 235 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 FGF14Q92915 247 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 JAKMIP2Q96AA8 810 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 TTLL2Q9BWV7 592 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 DUSP16Q9BY84 665 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 SMOC2Q9H3U7 446 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 DNAJC12Q9UKB3 198 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 CNTN6Q9UQ52 1028 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 NUMBLQ9Y6R0 609 aa17.53■□□□□ 0.4
CXCL1-201ENST00000395761 HHLA1C9JL84 531 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 TADA3O75528 432 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 TPM2P07951 284 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 PAEPP09466 180 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 VDRP11473 427 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 KRT5P13647 590 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 IFRD2Q12894 506 aaPredicted RBP17.52■□□□□ 0.4
CXCL1-201ENST00000395761 SGO2Q562F6 1265 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 GPR158Q5T848 1215 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 KLHDC7AQ5VTJ3 777 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 TXNDC8Q6A555 127 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 ANKRD20A12PQ8NF67 263 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.4
CXCL1-201ENST00000395761 SLC46A2Q9BY10 475 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 SLITRK6Q9H5Y7 841 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 UXTQ9UBK9 157 aaPredicted RBP17.52■□□□□ 0.4
CXCL1-201ENST00000395761 KIAA1257Q9ULG3 409 aa17.52■□□□□ 0.4
CXCL1-201ENST00000395761 CUL9Q8IWT3 2517 aa17.52■□□□□ 0.39
CXCL1-201ENST00000395761 LGALS16A8MUM7 142 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 NPR3P17342 541 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 FCARP24071 287 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 BRD2P25440 801 aaKnown RBP17.51■□□□□ 0.39
CXCL1-201ENST00000395761 SLC5A3P53794 718 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 TAF10Q12962 218 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
CXCL1-201ENST00000395761 PTPN21Q16825 1174 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 GOLGA7BQ2TAP0 167 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 ARHGAP15Q53QZ3 475 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 TANGO2Q6ICL3 276 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 ENOSF1Q7L5Y1 443 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 GPRIN1Q7Z2K8 1008 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 TTC30AQ86WT1 665 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 SLC44A3Q8N4M1 653 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 ANKRD52Q8NB46 1076 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 ZSCAN18Q8TBC5 510 aaPredicted RBP17.51■□□□□ 0.39
CXCL1-201ENST00000395761 SHC3Q92529 594 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 ASB16Q96NS5 453 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 GCNAQ96QF7 691 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 KXD1Q9BQD3 176 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 PLA2G2FQ9BZM2 168 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 GPR88Q9GZN0 384 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 EPHX3Q9H6B9 360 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 TASP1Q9H6P5 420 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 ACP6Q9NPH0 428 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 IL37Q9NZH6 218 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 IGSF9Q9P2J2 1179 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 TSPAN16Q9UKR8 245 aa17.51■□□□□ 0.39
CXCL1-201ENST00000395761 O00370 1275 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 FOXN3O00409 490 aaPredicted RBP17.5■□□□□ 0.39
CXCL1-201ENST00000395761 DCXO43602 365 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 PNMA6AP0CW24 399 aaPredicted RBP17.5■□□□□ 0.39
CXCL1-201ENST00000395761 YWHAQP27348 245 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 USP8P40818 1118 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 VIPR2P41587 438 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 UBXN1Q04323 297 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 FKBP15Q5T1M5 1219 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 MAB21L3Q8N8X9 362 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 UBA3Q8TBC4 463 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 SMARCD2Q92925 531 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms