RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 JADE2Q9NQC1 790 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 ARHGEF3Q9NR81 526 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 C9orf78Q9NZ63 289 aaPredicted RBP6.3□□□□□ -1.4
AP3S1-202ENST00000395548 ZFP69BQ9UJL9 534 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 ADAM29Q9UKF5 820 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 ATP8A1Q9Y2Q0 1164 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 TELO2Q9Y4R8 837 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 CTDP1Q9Y5B0 961 aaPredicted RBP6.3□□□□□ -1.4
AP3S1-202ENST00000395548 TRIP12Q14669 1992 aaPredicted RBP6.29□□□□□ -1.4
AP3S1-202ENST00000395548 FLT1P17948 1338 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 A0A1W2PRG0 241 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 ZNF839A8K0R7 811 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 RSPH10B2B2RC85 870 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 CAPN9O14815 690 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 UBR5O95071 2799 aaPredicted RBP6.29□□□□□ -1.4
AP3S1-202ENST00000395548 KRT18P05783 430 aaKnown RBP6.29□□□□□ -1.4
AP3S1-202ENST00000395548 RSPH10BP0C881 870 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 RDXP35241 583 aaKnown RBP6.29□□□□□ -1.4
AP3S1-202ENST00000395548 GNALP38405 381 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 GLRBP48167 497 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 SEPT2Q15019 361 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 BTBD8Q5XKL5 378 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 KIAA1841Q6NSI8 718 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 TAPT1Q6NXT6 567 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 DCLRE1AQ6PJP8 1040 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 ARHGAP36Q6ZRI8 547 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 Q6ZUG5 572 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 NME8Q8N427 588 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 NUDT10Q8NFP7 164 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 OR6J1Q8NGC5 347 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 AFG1LQ8WV93 481 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 NUDT11Q96G61 164 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 C8orf49Q96NF6 230 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 KLHL5Q96PQ7 755 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 DHRS4Q9BTZ2 278 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 C1QTNF3Q9BXJ4 246 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 OSBPL6Q9BZF3 934 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 VCPKMTQ9H867 229 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 CATSPERZQ9NTU4 200 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 PPP4R1LQ9P1A2 415 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 CFAP46Q8IYW2 2715 aa6.29□□□□□ -1.4
AP3S1-202ENST00000395548 SCN10AQ9Y5Y9 1956 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.28□□□□□ -1.4
AP3S1-202ENST00000395548 ACOT7O00154 380 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 MPHOSPH10O00566 681 aaKnown RBP6.28□□□□□ -1.4
AP3S1-202ENST00000395548 ATP2A1O14983 1001 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 NCAM2O15394 837 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 KLHL18O94889 574 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 KNG1P01042 644 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 CEACAM1P13688 526 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 GLULP15104 373 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 PHKA1P46020 1223 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 SQSTM1Q13501 440 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 TCEA2Q15560 299 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 CRY1Q16526 586 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 PHF19Q5T6S3 580 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 DAB2IPQ5VWQ8 1189 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 FOXB2Q5VYV0 432 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 SLFN13Q68D06 897 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 PPP4R4Q6NUP7 873 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 SPICE1Q8N0Z3 855 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 ZNF843Q8N446 348 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 STPG3Q8N7X2 389 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 REPS2Q8NFH8 660 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 PCDH19Q8TAB3 1148 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 NSUN4Q96CB9 384 aaKnown RBP6.28□□□□□ -1.4
AP3S1-202ENST00000395548 CTAGE1Q96RT6 745 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 MPHOSPH6Q99547 160 aaKnown RBP6.28□□□□□ -1.4
AP3S1-202ENST00000395548 WDR11Q9BZH6 1224 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 CD244Q9BZW8 370 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 PDGFCQ9NRA1 345 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 KCND1Q9NSA2 647 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 RAI14Q9P0K7 980 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 SAP30BPQ9UHR5 308 aaKnown RBP6.28□□□□□ -1.4
AP3S1-202ENST00000395548 PCDHA8Q9Y5H6 950 aa6.28□□□□□ -1.4
AP3S1-202ENST00000395548 FBN2P35556 2912 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 KANSL1LA0AUZ9 987 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 CCDC189A1A4V9 331 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 NARSO43776 548 aaKnown RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 ZBED4O75132 1171 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 TOP3BO95985 862 aaKnown RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 LDHAP00338 332 aaKnown RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 ZNF806P0C7X5 589 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 PTGS1P23219 599 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 GUCY1A2P33402 732 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 GJA4P35212 333 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 STARD6P59095 220 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 GNAI1P63096 354 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 DBPQ10586 325 aaPredicted RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 SIM2Q14190 667 aaPredicted RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 BRD3Q15059 726 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 PPP2R5AQ15172 486 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 ZRSR2Q15696 482 aaKnown RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 ATP2B3Q16720 1220 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 TKFCQ3LXA3 575 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 TMEM63BQ5T3F8 832 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 CCDC149Q6ZUS6 474 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 RALYLQ86SE5 291 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms