RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 RAD54LQ92698 747 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 NUSAP1Q9BXS6 441 aaKnown RBP16.97■□□□□ 0.31
SNCA-205ENST00000394991 ST6GALNAC4Q9H4F1 302 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 SLC32A1Q9H598 525 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 ZDHHC4Q9NPG8 344 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 FSCN3Q9NQT6 498 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 CIZ1Q9ULV3 898 aaPredicted RBP16.97■□□□□ 0.31
SNCA-205ENST00000394991 PLXNB3Q9ULL4 1909 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 TAF4O00268 1085 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 SLC26A4O43511 780 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 HUS1O60921 280 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 KRT18P05783 430 aaKnown RBP16.96■□□□□ 0.31
SNCA-205ENST00000394991 SLC6A11P48066 632 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 SIM1P81133 766 aaPredicted RBP16.96■□□□□ 0.31
SNCA-205ENST00000394991 TFAMQ00059 246 aaKnown RBP16.96■□□□□ 0.31
SNCA-205ENST00000394991 MAP7D1Q3KQU3 841 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 EMC10Q5UCC4 262 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 PEAR1Q5VY43 1037 aaPredicted RBP16.96■□□□□ 0.31
SNCA-205ENST00000394991 MCTP1Q6DN14 999 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 FILIP1Q7Z7B0 1213 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 C12orf40Q86WS4 652 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 SPATA2LQ8IUW3 424 aaPredicted RBP16.96■□□□□ 0.31
SNCA-205ENST00000394991 SYT12Q8IV01 421 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 BRSK2Q8IWQ3 736 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 TMEM86AQ8N2M4 240 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 FSIP1Q8NA03 581 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 WHAMMQ8TF30 809 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 CALML4Q96GE6 196 aa16.96■□□□□ 0.31
SNCA-205ENST00000394991 FUBP3Q96I24 572 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNCA-205ENST00000394991 IGSF10Q6WRI0 2623 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 GABRDO14764 452 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 SCAMP3O14828 347 aaKnown RBP16.95■□□□□ 0.3
SNCA-205ENST00000394991 ATP2C2O75185 946 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 PPP1R37O75864 691 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 ABCD1P33897 745 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 TIE1P35590 1138 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 MAGEA11P43364 429 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 KIR2DL1P43626 348 aaPredicted RBP16.95■□□□□ 0.3
SNCA-205ENST00000394991 USP46P62068 366 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 FAM193AP78312 1265 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 GRIN1Q05586 938 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 DHCR24Q15392 516 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 FAM171BQ6P995 826 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 SLC23A3Q6PIS1 610 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 SFR1Q86XK3 245 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 ADGRF2Q8IZF7 708 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 LRRC52Q8N7C0 313 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 SPACA7Q96KW9 195 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 AK8Q96MA6 479 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 FAM213AQ9BRX8 229 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 GDAP2Q9NXN4 497 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 SIX4Q9UIU6 781 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 PILRBQ9UKJ0 227 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 SNX9Q9Y5X1 595 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 ACACAQ13085 2346 aa16.95■□□□□ 0.3
SNCA-205ENST00000394991 UPK3BL1B0FP48 263 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 UPK3BL2E5RIL1 263 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 MAP3K13O43283 966 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 ADAM23O75077 832 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 CAPNS1P04632 268 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 ITPKAP23677 461 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 UBA7P41226 1012 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 KCNA1Q09470 495 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 SOWAHAQ2M3V2 549 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 LYSMD4Q5XG99 296 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 ZNF720Q7Z2F6 126 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 ADGRG2Q8IZP9 1017 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 SPATA18Q8TC71 538 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 HMGB4Q8WW32 186 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 MYLPFQ96A32 169 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 SAAL1Q96ER3 474 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 PNKPQ96T60 521 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 STRA6Q9BX79 667 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 RNF38Q9H0F5 515 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 FREM2Q5SZK8 3169 aa16.94■□□□□ 0.3
SNCA-205ENST00000394991 APC2O95996 2303 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 FAM221BA6H8Z2 402 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 TULP1O00294 542 aaPredicted RBP16.93■□□□□ 0.3
SNCA-205ENST00000394991 KAT7O95251 611 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 OLFM2O95897 454 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 CFIP05156 583 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 PCSK1P29120 753 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 LHX1P48742 406 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 PSMC1P62191 440 aaKnown RBP16.93■□□□□ 0.3
SNCA-205ENST00000394991 SLC7A9P82251 487 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 KDSRQ06136 332 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 CHCHD4Q8N4Q1 142 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 CSGALNACT2Q8N6G5 542 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 TOP6BLQ8N6T0 577 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 KBTBD7Q8WVZ9 684 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 LARP4BQ92615 738 aaKnown RBP16.93■□□□□ 0.3
SNCA-205ENST00000394991 HVCN1Q96D96 273 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 SPATA17Q96L03 361 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 KIF2CQ99661 725 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 SYT15Q9BQS2 421 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 POLMQ9NP87 494 aaPredicted RBP16.93■□□□□ 0.3
SNCA-205ENST00000394991 CRTAC1Q9NQ79 661 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 BCCIPQ9P287 314 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNCA-205ENST00000394991 ITGA11Q9UKX5 1188 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms