RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 FAM228AQ86W67 206 aa12.68□□□□□ -0.38
SIN3A-202ENST00000394947 DNAAF5Q86Y56 855 aa12.68□□□□□ -0.38
SIN3A-202ENST00000394947 DENND6AQ8IWF6 608 aa12.68□□□□□ -0.38
SIN3A-202ENST00000394947 RBBP8Q99708 897 aa12.68□□□□□ -0.38
SIN3A-202ENST00000394947 SH3BP4Q9P0V3 963 aa12.68□□□□□ -0.38
SIN3A-202ENST00000394947 MGAT4DA6NG13 374 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 AREL1O15033 823 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 HNRNPRO43390 633 aaKnown RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ITGB3P05106 788 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 COPAP53621 1224 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ZIM3Q96PE6 472 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 MED15Q96RN5 788 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 STRBPQ96SI9 672 aaKnown RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 CATSPERBQ9H7T0 1116 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 TRIM3O75382 744 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 TFRCP02786 760 aaKnown RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 CHRNA5P30532 468 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 PTGER2P43116 358 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ZNF157P51786 506 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 CBFBQ13951 182 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 AASDHQ4L235 1098 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 EFCAB12Q6NXP0 572 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 REEP2Q9BRK0 252 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ARIH1Q9Y4X5 557 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 M0QYT0 321 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 PUDPQ08623 228 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 BARGINQ6ZT62 677 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 PTAR1Q7Z6K3 402 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ZSCAN18Q8TBC5 510 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 BTBD9Q96Q07 612 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 KCTD14Q9BQ13 255 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 TINF2Q9BSI4 451 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 SENP6Q9GZR1 1112 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 PLEKHG1Q9ULL1 1385 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 TRIM49D1C9J1S8 452 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 TCEA3O75764 348 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 GGPS1O95749 300 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ERCC2P18074 760 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 PSMA3P25788 255 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 TAP1Q03518 808 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 RNASE12Q5GAN4 147 aaKnown RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 NANOGNBQ7Z5D8 188 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 PHF21BQ96EK2 531 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ZNF333Q96JL9 665 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 XPO6Q96QU8 1125 aaKnown RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 SLC9A7Q96T83 725 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 WDCPQ9H6R7 721 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 NEUROD4Q9HD90 331 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 APEX2Q9UBZ4 518 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ZMYM5Q9UJ78 669 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 CCNT2O60583 730 aaKnown RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 PPP1R37O75864 691 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 INSRP06213 1382 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 GPD1P21695 349 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 KRT20P35900 424 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 CRYMQ14894 314 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 RABL6Q3YEC7 729 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 FGD3Q5JSP0 725 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 POTEAQ6S8J7 498 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 TMEM79Q9BSE2 394 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 SEMA6AQ9H2E6 1030 aa12.67□□□□□ -0.38
SIN3A-202ENST00000394947 ELL3Q9HB65 397 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-202ENST00000394947 MBL2P11226 248 aaPredicted RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 CDC25CP30307 473 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 EPS8Q12929 822 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 ZCWPW2Q504Y3 356 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 DUSP12Q9UNI6 340 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 LRRIQ3A6PVS8 624 aaPredicted RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 AGTP01019 485 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 SP100P23497 879 aaPredicted RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 SFNP31947 248 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 RGS2P41220 211 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 CCT8P50990 548 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 ARMC4Q5T2S8 1044 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 TRIM72Q6ZMU5 477 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 AGGF1Q8N302 714 aaeCLIP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 SERAC1Q96JX3 654 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 MTO1Q9Y2Z2 717 aaKnown RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 PTGES3LE9PB15 166 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 TRAPPC3O43617 180 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 ACADMP11310 421 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 EPHB2P29323 1055 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 SHC4Q6S5L8 630 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 STX12Q86Y82 276 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 ITSN2Q9NZM3 1697 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 GARTP22102 1010 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 CEBPGP53567 150 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 RBP5P82980 135 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 MADCAM1Q13477 382 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 RELTQ969Z4 430 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms