RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KLHL38Q2WGJ6 581 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 BRSK2Q8IWQ3 736 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 BANPQ8N9N5 519 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 MTMR12Q9C0I1 747 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 DENND2DQ9H6A0 471 aaPredicted RBP19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 DCTN4Q9UJW0 460 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 MAFBQ9Y5Q3 323 aaPredicted RBP19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 NEBLO76041 1014 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 TMEM63AO94886 807 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 ITGBL1O95965 494 aaPredicted RBP19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 TROVE2P10155 538 aaKnown RBP eCLIP19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 RFC1P35251 1148 aaPredicted RBP19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 SEPT7Q16181 437 aaKnown RBP19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 SLC10A4Q96EP9 437 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 MIPEPQ99797 713 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 FAM167BQ9BTA0 163 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 GBA2Q9HCG7 927 aaPredicted RBP19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 ZNF302Q9NR11 478 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 EFR3BQ9Y2G0 817 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 LIN7AO14910 233 aaPredicted RBP19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 TM9SF1O15321 606 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 EIF4BP23588 611 aaKnown RBP19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 PSMA2P25787 234 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 KCNT1Q5JUK3 1230 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 BBS12Q6ZW61 710 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 WDR49Q8IV35 697 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 JOSD2Q8TAC2 188 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 PTPRN2Q92932 1015 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 TMEM134Q9H6X4 195 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 TJP2Q9UDY2 1190 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 PCDHGC3Q9UN70 934 aa19.21■□□□□ 0.67
PCDHA1-202ENST00000394633 FAM189A1O60320 539 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 ENTPD5O75356 428 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 LRCH4O75427 683 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 LUC7L3O95232 432 aaKnown RBP19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 WEE2P0C1S8 567 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 CAPSQ13938 189 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 BBS9Q3SYG4 887 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 CST9Q5W186 159 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 UNC45BQ8IWX7 931 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 KIAA0319LQ8IZA0 1049 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 SPDL1Q96EA4 605 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 NIF3L1Q9GZT8 377 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 VPS11Q9H270 941 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 TXNRD2Q9NNW7 524 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 CD48P09326 243 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 KDELR1P24390 212 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 TAZQ16635 292 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 PTPN20Q4JDL3 420 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 DENND1BQ6P3S1 775 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 ZBTB33Q86T24 672 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 PALM2Q8IXS6 379 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 MICAL1Q8TDZ2 1067 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 SH3TC2Q8TF17 1288 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 RSAD2Q8WXG1 361 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 SLC7A3Q8WY07 619 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 MANSC1Q9H8J5 431 aa19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 ALG13Q9NP73 1137 aaKnown RBP19.2■□□□□ 0.66
PCDHA1-202ENST00000394633 ANK1P16157 1881 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 H0Y3Z8 333 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 STAM2O75886 525 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 ATG7O95352 703 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 MARK3P27448 753 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 AP3M2P53677 418 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 GNPTABQ3T906 1256 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 RFWD3Q6PCD5 774 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 SCARA5Q6ZMJ2 495 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 TTC13Q8NBP0 860 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 ALKBH8Q96BT7 664 aaKnown RBP19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 FRMD8P1Q9BZ68 369 aaPredicted RBP19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 RPL26L1Q9UNX3 145 aaKnown RBP19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 TRIM68Q6AZZ1 485 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 LRRC6Q86X45 466 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 CADM1Q9BY67 442 aaKnown RBP19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 NIFKQ9BYG3 293 aaKnown RBP19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 ACAD9Q9H845 621 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 ARL8BQ9NVJ2 186 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 HEY2Q9UBP5 337 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 CYTH4Q9UIA0 394 aa19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 XPO7Q9UIA9 1087 aaKnown RBP19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 CORO1CQ9ULV4 474 aaPredicted RBP19.19■□□□□ 0.66
PCDHA1-202ENST00000394633 A0A0G2JND7 137 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 SIGLEC16A6NMB1 481 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 ADCY3O60266 1144 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 HNRNPCL1O60812 293 aaKnown RBP19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 CNMDO75829 334 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 KRT7P08729 469 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 KRT3P12035 628 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 CAPRIN2Q6IMN6 1127 aaKnown RBP19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 IGDCC3Q8IVU1 814 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 TSSK1BQ9BXA7 367 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 STRIP2Q9ULQ0 834 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 CHMP2BQ9UQN3 213 aa19.18■□□□□ 0.66
PCDHA1-202ENST00000394633 HAUS5O94927 633 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 CYP2C8P10632 490 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 PTDSS1P48651 473 aaKnown RBP19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 GRM1Q13255 1194 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 SNAPC2Q13487 334 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms