RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TRPM5Q9NZQ8 1165 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 CGNQ9P2M7 1197 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 WNT6Q9Y6F9 365 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 PTPRDP23468 1912 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 TULP1O00294 542 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 TM4SF5O14894 197 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 TGFB1I1O43294 461 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 GDF9O60383 454 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 APBB3O95704 486 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 OLFM2O95897 454 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 ANXA13P27216 316 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 GRIK1P39086 918 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 PXNP49023 591 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 PSMC1P62191 440 aaKnown RBP18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 SLC7A9P82251 487 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 PSMD6Q15008 389 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 FAM26FQ5R3K3 315 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 C11orf74Q86VG3 221 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 C12orf56Q8IXR9 622 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 C12orf50Q8NA57 414 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 RPLP0P6Q8NHW5 317 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 ZNF396Q96N95 335 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 MMS19Q96T76 1030 aa18.67■□□□□ 0.58
SNRPA1-202ENST00000394082 HELZP42694 1942 aaKnown RBP18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 KMT2BQ9UMN6 2715 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 EML5Q05BV3 1969 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 ZNF840PA6NDX5 716 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 CUTAO60888 179 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 ATICP31939 592 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 GNL1P36915 607 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 ASIC1P78348 528 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 DMC1Q14565 340 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 PLK5Q496M5 336 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 AASDHQ4L235 1098 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 IL31Q6EBC2 164 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 XXYLT1Q8NBI6 393 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 HPS3Q969F9 1004 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 FNBP1Q96RU3 617 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 CGRRF1Q99675 332 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 ELOVL4Q9GZR5 314 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 VPS45Q9NRW7 570 aa18.66■□□□□ 0.58
SNRPA1-202ENST00000394082 KIAA1549LQ6ZVL6 1849 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 K7ELQ4 463 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 SLC9A3R1O14745 358 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 RHOBTB1O94844 696 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 CST3P01034 146 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 PDGFRBP09619 1106 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 TNNI1P19237 187 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 EIF2DP41214 584 aaKnown RBP18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 ZXDBP98169 803 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 CYP27A1Q02318 531 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 CYP24A1Q07973 514 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 ELF2Q15723 593 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 BMT2Q1RMZ1 405 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 NAIF1Q69YI7 327 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 UNC13DQ70J99 1090 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 HS2ST1Q7LGA3 356 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 TMEM174Q8WUU8 243 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 SCFD1Q8WVM8 642 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 HHIPQ96QV1 700 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 DUSP15Q9H1R2 295 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 LINC00597Q9H2U6 94 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 SNX25Q9H3E2 840 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 VRTNQ9H8Y1 702 aa18.65■□□□□ 0.58
SNRPA1-202ENST00000394082 ATG2BQ96BY7 2078 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 PVALEFA0A1B0GWK0 134 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 LEFTY2O00292 366 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 OAS1P00973 400 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 DLATP10515 647 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 MPLP40238 635 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 OPRD1P41143 372 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 USP46P62068 366 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 PSMD2Q13200 908 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 SF3A2Q15428 464 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 WDR72Q3MJ13 1102 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 SHC4Q6S5L8 630 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 DDX42Q86XP3 938 aaKnown RBP eCLIP18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 ADGRG2Q8IZP9 1017 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 USP33Q8TEY7 942 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 OVCA2Q8WZ82 227 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 DHX58Q96C10 678 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 SLITRK1Q96PX8 696 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 DUSP9Q99956 384 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 MRPL45Q9BRJ2 306 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 MYO16Q9Y6X6 1858 aa18.64■□□□□ 0.57
SNRPA1-202ENST00000394082 F8VP50 259 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 PTPN1P18031 435 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 AP3M2P53677 418 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 TNNC1P63316 161 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 MRPS21P82921 87 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 GAB4Q2WGN9 574 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 HSF5Q4G112 596 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 MDH1BQ5I0G3 518 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 TDRD10Q5VZ19 366 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 RASSF3Q86WH2 238 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 OR6B3Q8NGW1 331 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 SYAP1Q96A49 352 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 RNF38Q9H0F5 515 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 XYLT2Q9H1B5 865 aa18.63■□□□□ 0.57
SNRPA1-202ENST00000394082 NME7Q9Y5B8 376 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms