RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZSWIM3Q96MP5 696 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 KREMEN1Q96MU8 473 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 SMOQ99835 787 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 TASP1Q9H6P5 420 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 CSNK1G1Q9HCP0 422 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 APEX2Q9UBZ4 518 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 ZMYM5Q9UJ78 669 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 MYH10P35580 1976 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 PAEPP09466 180 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 VDRP11473 427 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 CD19P15391 556 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 CYP4F8P98187 520 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 NFKBIBQ15653 356 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 ZSCAN23Q3MJ62 389 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 SGO2Q562F6 1265 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 FAM78AQ5JUQ0 283 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 POTEHQ6S545 545 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 SLC44A3Q8N4M1 653 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 FGF14Q92915 247 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 TTLL2Q9BWV7 592 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 DUSP16Q9BY84 665 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 COMMD8Q9NX08 183 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 LIMA1Q9UHB6 759 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 NUMBLQ9Y6R0 609 aa20.12■□□□□ 0.81
PDLIM7-204ENST00000393546 SOBPA7XYQ1 873 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 BECN2A8MW95 431 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 BEST1O76090 585 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 ZNF18P17022 549 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 DDX6P26196 483 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 YWHAQP27348 245 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 COPB1P53618 953 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 USP46P62068 366 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 ZXDAP98168 799 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 FKBP15Q5T1M5 1219 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 TMEM150AQ86TG1 271 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 UBALD2Q8IYN6 164 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 RBBP8NLQ8NC74 664 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 ZMIZ2Q8NF64 920 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 ST13P5Q8NFI4 369 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 ZSCAN18Q8TBC5 510 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 EDAQ92838 391 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 SMARCD2Q92925 531 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 ASB16Q96NS5 453 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 ZFP14Q9HCL3 533 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 TRPM5Q9NZQ8 1165 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 GREB1Q4ZG55 1949 aa20.11■□□□□ 0.81
PDLIM7-204ENST00000393546 LRRC10BA6NIK2 292 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 RNF225M0QZC1 329 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 TNFRSF10BO14763 440 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 ECI2O75521 394 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 KRT5P13647 590 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 NPR3P17342 541 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 PPP3CCP48454 512 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 SLC8A3P57103 927 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 IFRD2Q12894 506 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 ARHGAP44Q17R89 818 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 STXBP5Q5T5C0 1151 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 TANGO2Q6ICL3 276 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 GJB7Q6PEY0 223 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 CLEC20AQ6ZU45 233 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 DHX40Q8IX18 779 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 ANKRD52Q8NB46 1076 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 ELSPBP1Q96BH3 223 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 SLITRK1Q96PX8 696 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 EPHX3Q9H6B9 360 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 TRPV4Q9HBA0 871 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 HESX1Q9UBX0 185 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 CNTN6Q9UQ52 1028 aa20.1■□□□□ 0.81
PDLIM7-204ENST00000393546 CAVIN2O95810 425 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 SLC5A3P53794 718 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 APBA1Q02410 837 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 KCNMA1Q12791 1236 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 TAF10Q12962 218 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 TXNDC8Q6A555 127 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 SMYD5Q6GMV2 418 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 MON1AQ86VX9 555 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 ARID3BQ8IVW6 561 aaPredicted RBP20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 E2F7Q96AV8 911 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 KXD1Q9BQD3 176 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 RPP25Q9BUL9 199 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 SLC46A2Q9BY10 475 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 UBXN6Q9BZV1 441 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 HSD3B7Q9H2F3 369 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 PNPLA8Q9NP80 782 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 SIX2Q9NPC8 291 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 IL37Q9NZH6 218 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 DNAJC12Q9UKB3 198 aa20.09■□□□□ 0.81
PDLIM7-204ENST00000393546 WEE1P30291 646 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 ZNF132P52740 706 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 IQCB1Q15051 598 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 STILQ15468 1287 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 CNGA2Q16280 664 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 GOLGA7BQ2TAP0 167 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 MAB21L3Q8N8X9 362 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 PDZD8Q8NEN9 1154 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 SCAMP5Q8TAC9 235 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 OVCA2Q8WZ82 227 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 FBXO32Q969P5 355 aa20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 LSM14BQ9BX40 385 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-204ENST00000393546 FBXO44Q9H4M3 255 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms