RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 IGDCC3Q8IVU1 814 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 MICALL2Q8IY33 904 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 KCTD6Q8NC69 237 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 PTPRN2Q92932 1015 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 CYTH2Q99418 400 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 HOXC10Q9NYD6 342 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 WDR35Q9P2L0 1181 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 NXF1Q9UBU9 619 aaKnown RBP19.72■□□□□ 0.75
CBX1-202ENST00000393408 PCSK1NQ9UHG2 260 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 DCTN4Q9UJW0 460 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 CHMP2BQ9UQN3 213 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 E7ENQ6 273 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 HNRNPCL1O60812 293 aaKnown RBP19.71■□□□□ 0.75
CBX1-202ENST00000393408 TNNC2P02585 160 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 ERBB2P04626 1255 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 TPBGLP0DKB5 382 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 DPYSL3Q14195 570 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 TAF5Q15542 800 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 ENDOVQ8N8Q3 282 aaKnown RBP19.71■□□□□ 0.75
CBX1-202ENST00000393408 RPL26L1Q9UNX3 145 aaKnown RBP19.71■□□□□ 0.75
CBX1-202ENST00000393408 MCF2LO15068 1137 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 DHRS4L1P0CG22 281 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 RBP3P10745 1247 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 MIPP30301 263 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 HIRAP54198 1017 aaPredicted RBP19.71■□□□□ 0.75
CBX1-202ENST00000393408 RAD23BP54727 409 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 BASP1P80723 227 aaKnown RBP19.71■□□□□ 0.75
CBX1-202ENST00000393408 RNF149Q8NC42 400 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 CHST13Q8NET6 341 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 AFG3L2Q9Y4W6 797 aa19.71■□□□□ 0.75
CBX1-202ENST00000393408 B4GALT4O60513 344 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 MT-ND3P03897 115 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 PROZP22891 400 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 ELK3P41970 407 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 NEK3P51956 506 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 NRLP54845 237 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 PRAMEF18Q5VWM3 479 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 ZBTB8OSQ8IWT0 167 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 SH3TC2Q8TF17 1288 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 ANKRD36BP1Q96IX9 119 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 NUDCD1Q96RS6 583 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 BCO2Q9BYV7 579 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 TRUB2O95900 331 aaKnown RBP19.7■□□□□ 0.74
CBX1-202ENST00000393408 TCF7P36402 384 aaPredicted RBP19.7■□□□□ 0.74
CBX1-202ENST00000393408 TAF11Q15544 211 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 CHSY1Q86X52 802 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 SPATA18Q8TC71 538 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 HSPH1Q92598 858 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 TSSK1BQ9BXA7 367 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 TRIM55Q9BYV6 548 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 DENND2DQ9H6A0 471 aaPredicted RBP19.7■□□□□ 0.74
CBX1-202ENST00000393408 SYNCQ9H7C4 482 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 ALG13Q9NP73 1137 aaKnown RBP19.7■□□□□ 0.74
CBX1-202ENST00000393408 LRRC42Q9Y546 428 aa19.7■□□□□ 0.74
CBX1-202ENST00000393408 IQANK1A0A1B0GTG1 560 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 LPXNO60711 386 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 ETV4P43268 484 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 GMPSP49915 693 aaPredicted RBP19.69■□□□□ 0.74
CBX1-202ENST00000393408 PTK7Q13308 1070 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 MPZL3Q6UWV2 235 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 SH2D5Q6ZV89 423 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 LRRC6Q86X45 466 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 SLC44A1Q8WWI5 657 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 APOPT1Q96IL0 206 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 SERAC1Q96JX3 654 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 MIPEPQ99797 713 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 SDCBP2Q9H190 292 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 PTPRHQ9HD43 1115 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 PPME1Q9Y570 386 aa19.69■□□□□ 0.74
CBX1-202ENST00000393408 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.68■□□□□ 0.74
CBX1-202ENST00000393408 TCRBV9S1A1TA0A576 114 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 CDH8P55286 799 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 OSTNP61366 133 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 SLC18A2Q05940 514 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 ORC1Q13415 861 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 MXD4Q14582 209 aaPredicted RBP19.68■□□□□ 0.74
CBX1-202ENST00000393408 TSHZ1Q6ZSZ6 1077 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 SEPT1Q8WYJ6 367 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 MCRS1Q96EZ8 462 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 NAF1Q96HR8 494 aaKnown RBP19.68■□□□□ 0.74
CBX1-202ENST00000393408 CALN1Q9BXU9 219 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 RSAD1Q9HA92 442 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 USP18Q9UMW8 372 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 TEX264Q9Y6I9 313 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 A0A0G2JND7 137 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 MARK3P27448 753 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 KCNJ11Q14654 390 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 ACAP1Q15027 740 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 ZNF667Q5HYK9 610 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 LRRC71Q8N4P6 559 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 CEP120Q8N960 986 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 SLC4A11Q8NBS3 891 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 TTC8Q8TAM2 541 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 PTCD3Q96EY7 689 aaKnown RBP19.68■□□□□ 0.74
CBX1-202ENST00000393408 FAM167AQ96KS9 214 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 PEBP4Q96S96 227 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 HEY2Q9UBP5 337 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 SIX4Q9UIU6 781 aa19.68■□□□□ 0.74
CBX1-202ENST00000393408 KBTBD13C9JR72 458 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 RNF8O76064 485 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms