RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ZDHHC18Q9NUE0 388 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 PSMC3IPQ9P2W1 217 aaPredicted RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 UBOX5O94941 541 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 ASS1P00966 412 aaKnown RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 GH1P01241 217 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 ELF3P78545 371 aaPredicted RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 OVGP1Q12889 678 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 NME3Q13232 169 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 JADE1Q6IE81 842 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 SIX6OS1Q8N1H7 587 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 FBXO36Q8NEA4 188 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 REPS2Q8NFH8 660 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 AGAP11Q8TF27 550 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 ITFG2Q969R8 447 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 OPTNQ96CV9 577 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 DPP3Q9NY33 737 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 GPD1P21695 349 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 ZNF280AP59817 542 aaPredicted RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 TMPRSS15P98073 1019 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 RXFP2Q8WXD0 754 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 ATP2A3Q93084 1043 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 ACO2Q99798 780 aaKnown RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 USP18Q9UMW8 372 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 SMCHD1A6NHR9 2005 aa11□□□□□ -0.65
CALD1-203ENST00000393118 ASAP2O43150 1006 aa11□□□□□ -0.65
CALD1-203ENST00000393118 MAFO75444 373 aaPredicted RBP11□□□□□ -0.65
CALD1-203ENST00000393118 KRT37O76014 449 aa11□□□□□ -0.65
CALD1-203ENST00000393118 VNN1O95497 513 aa11□□□□□ -0.65
CALD1-203ENST00000393118 LSM8O95777 96 aaKnown RBP11□□□□□ -0.65
CALD1-203ENST00000393118 CCND1P24385 295 aa11□□□□□ -0.65
CALD1-203ENST00000393118 ECHS1P30084 290 aa11□□□□□ -0.65
CALD1-203ENST00000393118 SEPT6Q14141 434 aa11□□□□□ -0.65
CALD1-203ENST00000393118 CCDC14Q49A88 953 aa11□□□□□ -0.65
CALD1-203ENST00000393118 B3GNT9Q6UX72 402 aa11□□□□□ -0.65
CALD1-203ENST00000393118 RIOX2Q8IUF8 465 aa11□□□□□ -0.65
CALD1-203ENST00000393118 KLHL23Q8NBE8 558 aa11□□□□□ -0.65
CALD1-203ENST00000393118 CEP70Q8NHQ1 597 aa11□□□□□ -0.65
CALD1-203ENST00000393118 TMEM176AQ96HP8 235 aa11□□□□□ -0.65
CALD1-203ENST00000393118 NAF1Q96HR8 494 aaKnown RBP11□□□□□ -0.65
CALD1-203ENST00000393118 SLC5A4Q9NY91 659 aa11□□□□□ -0.65
CALD1-203ENST00000393118 PTPRJQ12913 1337 aa11□□□□□ -0.65
CALD1-203ENST00000393118 DNALI1O14645 258 aaPredicted RBP11□□□□□ -0.65
CALD1-203ENST00000393118 APOL1O14791 398 aa11□□□□□ -0.65
CALD1-203ENST00000393118 RGS20O76081 388 aa11□□□□□ -0.65
CALD1-203ENST00000393118 MYL3P08590 195 aa11□□□□□ -0.65
CALD1-203ENST00000393118 UNGP13051 313 aaPredicted RBP11□□□□□ -0.65
CALD1-203ENST00000393118 NDST1P52848 882 aa11□□□□□ -0.65
CALD1-203ENST00000393118 RNASELQ05823 741 aaKnown RBP11□□□□□ -0.65
CALD1-203ENST00000393118 PKN2Q16513 984 aaKnown RBP11□□□□□ -0.65
CALD1-203ENST00000393118 MON1BQ7L1V2 547 aa11□□□□□ -0.65
CALD1-203ENST00000393118 PPIL6Q8IXY8 311 aa11□□□□□ -0.65
CALD1-203ENST00000393118 DEPDC1BQ8WUY9 529 aa11□□□□□ -0.65
CALD1-203ENST00000393118 EZH1Q92800 747 aaPredicted RBP11□□□□□ -0.65
CALD1-203ENST00000393118 SLITRK1Q96PX8 696 aa11□□□□□ -0.65
CALD1-203ENST00000393118 CYTH2Q99418 400 aa11□□□□□ -0.65
CALD1-203ENST00000393118 GCOM2Q9BZD3 368 aaPredicted RBP11□□□□□ -0.65
CALD1-203ENST00000393118 TMEM134Q9H6X4 195 aa11□□□□□ -0.65
CALD1-203ENST00000393118 TXLNGQ9NUQ3 528 aa11□□□□□ -0.65
CALD1-203ENST00000393118 MYPNQ86TC9 1320 aa11□□□□□ -0.65
CALD1-203ENST00000393118 MAGEB2O15479 319 aa11□□□□□ -0.65
CALD1-203ENST00000393118 XPOTO43592 962 aaKnown RBP11□□□□□ -0.65
CALD1-203ENST00000393118 GAS2O43903 313 aaKnown RBP11□□□□□ -0.65
CALD1-203ENST00000393118 HUS1O60921 280 aa11□□□□□ -0.65
CALD1-203ENST00000393118 TCF4P15884 667 aa11□□□□□ -0.65
CALD1-203ENST00000393118 SESN2P58004 480 aaPredicted RBP11□□□□□ -0.65
CALD1-203ENST00000393118 MCL1Q07820 350 aa11□□□□□ -0.65
CALD1-203ENST00000393118 CNGA2Q16280 664 aa11□□□□□ -0.65
CALD1-203ENST00000393118 OLFML2BQ68BL8 750 aa11□□□□□ -0.65
CALD1-203ENST00000393118 LBX2Q6XYB7 198 aa11□□□□□ -0.65
CALD1-203ENST00000393118 JOSD2Q8TAC2 188 aa11□□□□□ -0.65
CALD1-203ENST00000393118 RSAD1Q9HA92 442 aa11□□□□□ -0.65
CALD1-203ENST00000393118 ABCF3Q9NUQ8 709 aa11□□□□□ -0.65
CALD1-203ENST00000393118 AFG3L2Q9Y4W6 797 aa11□□□□□ -0.65
CALD1-203ENST00000393118 COL5A3P25940 1745 aaPredicted RBP11□□□□□ -0.65
CALD1-203ENST00000393118 CFAP69A5D8W1 941 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 RARBP10826 455 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 DRD4P21917 467 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 MMP8P22894 467 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 MIPP30301 263 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 C15orf59Q2T9L4 293 aaPredicted RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 HEATR6Q6AI08 1181 aaKnown RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 PHF13Q86YI8 300 aaPredicted RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 GPRC5AQ8NFJ5 357 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 SREK1Q8WXA9 508 aaKnown RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 TRIM55Q9BYV6 548 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 ZNF518BQ9C0D4 1074 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 CDT1Q9H211 546 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 ADARB2Q9NS39 739 aaKnown RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 C2CD2Q9Y426 696 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 ARL2P36404 184 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 HADHBP55084 474 aaKnown RBP10.99□□□□□ -0.65
CALD1-203ENST00000393118 AP1B1Q10567 949 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 GPC2Q8N158 579 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 RAB3IL1Q8TBN0 382 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 CDKL2Q92772 493 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 ATXN7L3BQ96GX2 97 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 AP5M1Q9H0R1 490 aa10.99□□□□□ -0.65
CALD1-203ENST00000393118 ZC3H7BQ9UGR2 993 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms