RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 RPS6P62753 249 aaKnown RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 HERC4Q5GLZ8 1057 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 DUPD1Q68J44 220 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 GALNT18Q6P9A2 607 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 INTS5Q6P9B9 1019 aaKnown RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 DCDC5Q6ZRR9 648 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 PDSS2Q86YH6 399 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 LILRB4Q8NHJ6 448 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 RASSF5Q8WWW0 418 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 RFFLQ8WZ73 363 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 DCUN1D1Q96GG9 259 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 MED30Q96HR3 178 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 PRICKLE1Q96MT3 831 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 SLC4A9Q96Q91 983 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 HGH1Q9BTY7 390 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF717Q9BY31 904 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 GCOM2Q9BZD3 368 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 UNKQ9C0B0 810 aaKnown RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 EPB41L1Q9H4G0 881 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 PLK2Q9NYY3 685 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 ZSWIM5Q9P217 1185 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 HSFX1Q9UBD0 423 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 RFX7Q2KHR2 1363 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 NEDD4P46934 1319 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 A0A0G2JLW4 131 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 IQANK1A0A1B0GTG1 560 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 EVPLLA8MZ36 301 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 AREL1O15033 823 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 KIAA0391O15091 583 aaKnown RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 KLHL2O95198 593 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 GGPS1O95749 300 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CALM1P0DP23 149 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CALM2P0DP24 149 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CALM3P0DP25 149 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 NELFEP18615 380 aaKnown RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CTTNQ14247 550 aaKnown RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 SFT2D3Q587I9 215 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 NLGN1Q8N2Q7 840 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 AGXT2Q9BYV1 514 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 ADNPQ9H2P0 1102 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 VWA5AO00534 786 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 RAD51BO15315 384 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 TOB1P50616 345 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 ITGA8P53708 1063 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 DEFA1P59665 94 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 DEFA3P59666 94 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 ACTR3P61158 418 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 NFIXQ14938 502 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 NEDD8Q15843 81 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 RSBN1LQ6PCB5 846 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 FAM9CQ8IZT9 166 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 AHI1Q8N157 1196 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 FAM172AQ8WUF8 416 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 GLMNQ92990 594 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CMTM5Q96DZ9 223 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 VPS35Q96QK1 796 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 TMEM109Q9BVC6 243 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 ACAT2Q9BWD1 397 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 IGSF9Q9P2J2 1179 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 STK36Q9NRP7 1315 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 PDZK1P1A8MUH7 402 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 FOXO6A8MYZ6 492 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 FOXD2O60548 495 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 ICMTO60725 284 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 CCNKO75909 580 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 BMP10O95393 424 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 MMP10P09238 476 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 EIF2AK2P19525 551 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 ADSLP30566 484 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 FOXN2P32314 431 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 S100A5P33763 92 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 TRAPPC10P48553 1259 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 HSD17B4P51659 736 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 AKR1D1P51857 326 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 GALCP54803 685 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 CAMK2BQ13554 666 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 STK11Q15831 433 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 IZUMO3Q5VZ72 239 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 RINT1Q6NUQ1 792 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 DEFB107AQ8IZN7 70 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 GIMAP8Q8ND71 665 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 RBM15BQ8NDT2 890 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 ALKBH8Q96BT7 664 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 FERD3LQ96RJ6 166 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 UPF3AQ9H1J1 476 aaKnown RBP7.92□□□□□ -1.14
VTI1A-201ENST00000393077 PIK3C2AO00443 1686 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 TSPAN4O14817 238 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 CYP26A1O43174 497 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 FCER1AP12319 257 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 RXRBP28702 533 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 GTF2H1P32780 548 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 MAGEA4P43358 317 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 THOP1P52888 689 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 BFSP2Q13515 415 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 MTMR2Q13614 643 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF846Q147U1 533 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 CYP2A13Q16696 494 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 ANO4Q32M45 955 aa7.92□□□□□ -1.14
VTI1A-201ENST00000393077 PGS1Q32NB8 556 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms