RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CORO1BQ9BR76 489 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 DNMT3BQ9UBC3 853 aaKnown RBP15.78■□□□□ 0.12
SUMO1-203ENST00000392246 SLC38A8A6NNN8 435 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 MBTPS2O43462 519 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 MICAL2O94851 1124 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 CYP11B1P15538 503 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 PDE6CP51160 858 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 TFF2Q03403 129 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 BST2Q10589 180 aaKnown RBP15.78■□□□□ 0.12
SUMO1-203ENST00000392246 TRIM14Q14142 442 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 MEA1Q16626 185 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 PKDCCQ504Y2 493 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 GRASPQ7Z6J2 395 aaPredicted RBP15.78■□□□□ 0.12
SUMO1-203ENST00000392246 NUP93Q8N1F7 819 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 LEMD2Q8NC56 503 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 ZNF397Q8NF99 534 aaPredicted RBP15.78■□□□□ 0.12
SUMO1-203ENST00000392246 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.78■□□□□ 0.12
SUMO1-203ENST00000392246 UBA3Q8TBC4 463 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 SUSD6Q92537 303 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 UBXN6Q9BZV1 441 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 WDR6Q9NNW5 1121 aaKnown RBP15.78■□□□□ 0.12
SUMO1-203ENST00000392246 PNPLA8Q9NP80 782 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 ASAH2Q9NR71 780 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 HCFC1R1Q9NWW0 138 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 EHD2Q9NZN4 543 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 CAPN11Q9UMQ6 739 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 FAM50BQ9Y247 325 aa15.78■□□□□ 0.12
SUMO1-203ENST00000392246 USP15Q9Y4E8 981 aaPredicted RBP15.78■□□□□ 0.12
SUMO1-203ENST00000392246 NOTCH4Q99466 2003 aa15.77■□□□□ 0.12
SUMO1-203ENST00000392246 ZNF638Q14966 1978 aaKnown RBP15.77■□□□□ 0.12
SUMO1-203ENST00000392246 XIRP2A4UGR9 3374 aa15.77■□□□□ 0.12
SUMO1-203ENST00000392246 GRXCR2A6NFK2 248 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 LRRC53A6NM62 1247 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 M0QYV0 167 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 RHOP08100 348 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 SETSIPP0DME0 302 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 FERP16591 822 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 KRT9P35527 623 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 ZNF75DP51815 510 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 PABPC1LQ4VXU2 614 aaKnown RBP15.77■□□□□ 0.11
SUMO1-203ENST00000392246 CYP4A22Q5TCH4 519 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 CPLX3Q8WVH0 158 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 MRFAP1L1Q96HT8 127 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 NUCKS1Q9H1E3 243 aaKnown RBP15.77■□□□□ 0.11
SUMO1-203ENST00000392246 AVENQ9NQS1 362 aaPredicted RBP15.77■□□□□ 0.11
SUMO1-203ENST00000392246 CDH22Q9UJ99 828 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 PCDHGC3Q9UN70 934 aa15.77■□□□□ 0.11
SUMO1-203ENST00000392246 MAGED2Q9UNF1 606 aaPredicted RBP15.77■□□□□ 0.11
SUMO1-203ENST00000392246 LUC7L2Q9Y383 392 aaKnown RBP15.77■□□□□ 0.11
SUMO1-203ENST00000392246 TNFRSF10BO14763 440 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 XPO1O14980 1071 aaKnown RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 RTN3O95197 1032 aaPredicted RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 GYPCP04921 128 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 TPM1P09493 284 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 HMGA1P17096 107 aaKnown RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 SSTR3P32745 418 aaPredicted RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 EPHA5P54756 1037 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 ZBED6P86452 979 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 ARID5AQ03989 594 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 PDE4CQ08493 712 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 MTMR3Q13615 1198 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 CBX2Q14781 532 aaPredicted RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 SFMBT2Q5VUG0 894 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 PTCRAQ6ISU1 281 aaPredicted RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 PDZD4Q76G19 769 aaPredicted RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 ZNF677Q86XU0 584 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 HS6ST3Q8IZP7 471 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 STKLD1Q8NE28 680 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 EPS8L1Q8TE68 723 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 TRMT2BQ96GJ1 504 aaKnown RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 MYRFLQ96LU7 910 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 LRRC3Q9BY71 257 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 COMMD8Q9NX08 183 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 AIPL1Q9NZN9 384 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 UXTQ9UBK9 157 aaPredicted RBP15.76■□□□□ 0.11
SUMO1-203ENST00000392246 PATJQ8NI35 1801 aa15.76■□□□□ 0.11
SUMO1-203ENST00000392246 CLUHO75153 1309 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 HHLA1C9JL84 531 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 ZNF197O14709 1029 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 FGF19O95750 216 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 PLA2G4AP47712 749 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 SLC5A3P53794 718 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 NTHL1P78549 312 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 DENND1BQ6P3S1 775 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 NOP9Q86U38 636 aaKnown RBP15.75■□□□□ 0.11
SUMO1-203ENST00000392246 PIGZQ86VD9 579 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 TMC8Q8IU68 726 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 SLC35F5Q8WV83 523 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 ATXN2LQ8WWM7 1075 aaKnown RBP15.75■□□□□ 0.11
SUMO1-203ENST00000392246 DDX1Q92499 740 aaKnown RBP15.75■□□□□ 0.11
SUMO1-203ENST00000392246 SECISBP2LQ93073 1101 aaKnown RBP15.75■□□□□ 0.11
SUMO1-203ENST00000392246 LHX5Q9H2C1 402 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 PDCL3Q9H2J4 239 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 FBXO44Q9H4M3 255 aa15.75■□□□□ 0.11
SUMO1-203ENST00000392246 CFHP08603 1231 aa15.74■□□□□ 0.11
SUMO1-203ENST00000392246 MYL4P12829 197 aa15.74■□□□□ 0.11
SUMO1-203ENST00000392246 FSHRP23945 695 aa15.74■□□□□ 0.11
SUMO1-203ENST00000392246 YWHAQP27348 245 aa15.74■□□□□ 0.11
SUMO1-203ENST00000392246 CASP14P31944 242 aa15.74■□□□□ 0.11
SUMO1-203ENST00000392246 GPD2P43304 727 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms