RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 BRD9Q9H8M2 597 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 RAB20Q9NX57 234 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 GCNT4Q9P109 453 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 HMGXB4Q9UGU5 601 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 MAGED2Q9UNF1 606 aaPredicted RBP12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 ZNF292O60281 2723 aa12.12□□□□□ -0.47
IGHV4-28-201ENST00000390612 EP300Q09472 2414 aaPredicted RBP12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 CFAP54Q96N23 3096 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 MYO16Q9Y6X6 1858 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 FAM92AA1XBS5 289 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 ZNF263O14978 683 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 PTPN5P54829 565 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 CBWD6Q4V339 395 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 CBWD3Q5JTY5 395 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 CBWD5Q5RIA9 395 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 ACOT1Q86TX2 421 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 CELF5Q8N6W0 485 aaKnown RBP12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 DTWD2Q8NBA8 298 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 ZMIZ2Q8NF64 920 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 RIN3Q8TB24 985 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 NELFBQ8WX92 580 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 MRPS31Q92665 395 aaKnown RBP12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 CLDN23Q96B33 292 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 FAM122AQ96E09 287 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 SLC22A12Q96S37 553 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 FOXQ1Q9C009 403 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 FAM124BQ9H5Z6 455 aaPredicted RBP12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 METTL14Q9HCE5 456 aaKnown RBP12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 CSNK1G1Q9HCP0 422 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 HEBP1Q9NRV9 189 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 CCL26Q9Y258 94 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 SIT1Q9Y3P8 196 aa12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 MTF2Q9Y483 593 aaPredicted RBP12.11□□□□□ -0.47
IGHV4-28-201ENST00000390612 BIN1O00499 593 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 CILPO75339 1184 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 TCF3P15923 654 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 PFKLP17858 780 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 PPP3CCP48454 512 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 MARSP56192 900 aaKnown RBP12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 ARHGAP29Q52LW3 1261 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 C12orf29Q8N999 325 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 BPIFB1Q8TDL5 484 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 TATDN2Q93075 761 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 MED15Q96RN5 788 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 KCNK16Q96T55 309 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 NELL2Q99435 816 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 HNRNPABQ99729 332 aaKnown RBP12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 SMOQ99835 787 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 FAM83CQ9BQN1 747 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 IMPG2Q9BZV3 1241 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 SMG9Q9H0W8 520 aaKnown RBP12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 MMRN2Q9H8L6 949 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 KIF9Q9HAQ2 790 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 LTB4R2Q9NPC1 389 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 EHD2Q9NZN4 543 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 OTOGLQ3ZCN5 2332 aa12.1□□□□□ -0.47
IGHV4-28-201ENST00000390612 GVINP1Q7Z2Y8 2422 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 BICDL2A1A5D9 508 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 ZNF840PA6NDX5 716 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 BEST1O76090 585 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 OLFM2O95897 454 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 DCNP07585 359 aaKnown RBP12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 CD72P21854 359 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 TARSP26639 723 aaKnown RBP12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 ANXA13P27216 316 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 AVPR1AP37288 418 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 ORC1Q13415 861 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 CAMK4Q16566 473 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 SNX30Q5VWJ9 437 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 KLHL10Q6JEL2 608 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 ZNF852Q6ZMS4 543 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 TPRG1Q6ZUI0 275 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 TRIM59Q8IWR1 403 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 NUP93Q8N1F7 819 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 LMO3Q8TAP4 145 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 SMARCD1Q96GM5 515 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 CYP2S1Q96SQ9 504 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 NT5C1AQ9BXI3 368 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 IRF2BPLQ9H1B7 796 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 CLSTN2Q9H4D0 955 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 LMBRD1Q9NUN5 540 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 COMMD8Q9NX08 183 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 TRPM5Q9NZQ8 1165 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 ATP8B3O60423 1300 aa12.09□□□□□ -0.47
IGHV4-28-201ENST00000390612 GPR179Q6PRD1 2367 aa12.08□□□□□ -0.47
IGHV4-28-201ENST00000390612 TRAV19A0A0A6YYK7 116 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 FAM170BA6NMN3 283 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 HHLA1C9JL84 531 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 STK25O00506 426 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 MAN2B1O00754 1011 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 DPYSL4O14531 572 aa12.08□□□□□ -0.48
IGHV4-28-201ENST00000390612 RTN3O95197 1032 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms