RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 RICTORQ6R327 1708 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 AKAP10O43572 662 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 ADORA2BP29275 332 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 KPNA2P52292 529 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 FASTKD3Q14CZ7 662 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 CRAMP1Q96RY5 1269 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 TASP1Q9H6P5 420 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 PACSIN3Q9UKS6 424 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 LIASO43766 372 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 CYP3A7P24462 503 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 GCNT1Q02742 428 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 ALYREFQ86V81 257 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 KATNAL2Q8IYT4 538 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 WDR18Q9BV38 432 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 MTFR1LQ9H019 292 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 LRRC4CQ9HCJ2 640 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 FNDC3AQ9Y2H6 1198 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 CDY1Q9Y6F8 540 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZC3H11AO75152 810 aaKnown RBP eCLIP13.66□□□□□ -0.224e-6■■■■□ 23.4
TRAPPC9-201ENST00000389328 WFS1O76024 890 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 PRKCBP05771 671 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 AP3M2P53677 418 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 TBL3Q12788 808 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 NME3Q13232 169 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 C16orf89Q6UX73 402 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 GADL1Q6ZQY3 521 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 RIPOR1Q6ZS17 1223 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 NRBF2Q96F24 287 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 NDUFA13Q9P0J0 144 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 ADGRA3Q8IWK6 1321 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 GSC2O15499 205 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 RAG1P15918 1043 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 MUTP22033 750 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 MTMR2Q13614 643 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 CCDC68Q9H2F9 335 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 PIH1D1Q9NWS0 290 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLC5A4Q9NY91 659 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 TPST1O60507 370 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 ALADP13716 330 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 LCP1P13796 627 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 IL1R1P14778 569 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 SP100P23497 879 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 RPL7AP62424 266 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 MAB21L3Q8N8X9 362 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 RNF169Q8NCN4 708 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 FAM192AQ9GZU8 254 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 NKX1-2Q9UD57 310 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 PAIP2BQ9ULR5 123 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 CASZ1Q86V15 1759 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 SPDYE5A6NIY4 337 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 LIN7AO14910 233 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 USP1O94782 785 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLC4A1P02730 911 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 TPBGLP0DKB5 382 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 GLRA2P23416 452 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 MYL6P60660 151 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 MAMLD1Q13495 774 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 RWDD4Q6NW29 188 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 CISHQ9NSE2 258 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.22
TRAPPC9-201ENST00000389328 PSMD10O75832 226 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 ANPEPP15144 967 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 GPD1P21695 349 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 OASLQ15646 514 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 C16orf46Q6P387 395 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 RAB44Q7Z6P3 723 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 IFNEQ86WN2 208 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 MRPL1Q9BYD6 325 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 RPAP3Q9H6T3 665 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 AFDNP55196 1824 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 SMNDC1O75940 238 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 ABHD2P08910 425 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 GARTP22102 1010 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 BST1Q10588 318 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 KLC3Q6P597 504 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 KDELC2Q7Z4H8 507 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 DISP2A7MBM2 1401 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZMYM2Q9UBW7 1377 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZNF669Q96BR6 464 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 SGF29Q96ES7 293 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 VPS39Q96JC1 886 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 CLPTM1LQ96KA5 538 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 MECRQ9BV79 373 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms