RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 MOGAT1Q96PD6 335 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PUS7Q96PZ0 661 aaKnown RBP3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MMS19Q96T76 1030 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 EFHD1Q9BUP0 239 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 GTPBP4Q9BZE4 634 aaKnown RBP3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 XPR1Q9UBH6 696 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 LRP12Q9Y561 859 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CCDC187A0A096LP49 1063 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 LY6G6EA0A0G2JKS1 128 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TCRBV5S1A1TA0A578 114 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 DSCR3O14972 297 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SNUPNO95149 360 aaKnown RBP3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 POU2F2P09086 479 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 UCP3P55916 312 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 RBMS2Q15434 407 aaKnown RBP3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 FAM187BQ17R55 369 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TRIM71Q2Q1W2 868 aaKnown RBP3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 KHDC1LQ5JSQ8 128 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MEX3CQ5U5Q3 659 aaKnown RBP3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ZNF813Q6ZN06 617 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CAND1Q86VP6 1230 aaKnown RBP3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 C16orf52Q8NHV5 167 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ADAMTS15Q8TE58 950 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PRR25Q96S07 402 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 DPCDQ9BVM2 203 aaPredicted RBP3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ASPSCR1Q9BZE9 553 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ASIC5Q9NY37 505 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SNX14Q9Y5W7 946 aa3.25□□□□□ -1.89
RNU6-1040P-201ENST00000383974 IGKV2D-30A0A075B6S6 120 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ALG1L2C9J202 215 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 AP4M1O00189 453 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PRKCBP05771 671 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PRF1P14222 555 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 LRPAP1P30533 357 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SLC11A2P49281 568 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 HTRA4P83105 476 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 AMPD3Q01432 767 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SATB1Q01826 763 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 KRT17Q04695 432 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 LY6KQ17RY6 165 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TMEM240Q5SV17 173 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 C10orf25Q5T742 122 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 BCDIN3DQ7Z5W3 292 aaKnown RBP3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ABRAQ8N0Z2 381 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CUL5Q93034 780 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MTFMTQ96DP5 389 aaKnown RBP3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MVB12AQ96EY5 273 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 VCPIP1Q96JH7 1222 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MESP1Q9BRJ9 268 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SARS2Q9NP81 518 aaKnown RBP3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MED16Q9Y2X0 877 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TMX2Q9Y320 296 aa3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.24□□□□□ -1.89
RNU6-1040P-201ENST00000383974 WASHC2CQ9Y4E1 1318 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TMEM232C9JQI7 657 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 GCATO75600 419 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 IL33O95760 270 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ALDH2P05091 517 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SCP2P22307 547 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 HOXD9P28356 352 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CCKARP32238 428 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PSG6Q00889 435 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 GHRHRQ02643 423 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MIDNQ504T8 468 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 AWAT1Q58HT5 328 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 RNF187Q5TA31 235 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 IZUMO1Q8IYV9 350 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PLBD2Q8NHP8 589 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 OSR1Q8TAX0 266 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 NSMCE1Q8WV22 266 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 HSPBAP1Q96EW2 488 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CDK5RAP3Q96JB5 506 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 FYTTD1Q96QD9 318 aaKnown RBP3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ARMT1Q9H993 441 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TRMT13Q9NUP7 481 aaKnown RBP3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TFCP2L1Q9NZI6 479 aa3.23□□□□□ -1.89
RNU6-1040P-201ENST00000383974 FAM90A10PA6NDY2 464 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 BTBD19C9JJ37 291 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 A1BGP04217 495 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TMEM191BP0C7N4 346 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MYCLP12524 364 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 KCNA3P22001 575 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 DGKEP52429 567 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 WNT3P56703 355 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MLC1Q15049 377 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TWIST1Q15672 202 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MGAT5BQ3V5L5 792 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SFTPA1Q8IWL2 248 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SIRT6Q8N6T7 355 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ZNF398Q8TD17 642 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ADAMTS18Q8TE60 1221 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PNISRQ8TF01 805 aaKnown RBP3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TMEM171Q8WVE6 324 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MRGPRX1Q96LB2 322 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 P2RX7Q99572 595 aaKnown RBP3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CGRRF1Q99675 332 aa3.22□□□□□ -1.89
RNU6-1040P-201ENST00000383974 C17orf80Q9BSJ5 609 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms