RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 STXBP5Q5T5C0 1151 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 GPR158Q5T848 1215 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 DENND5BQ6ZUT9 1274 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 SPATA17Q96L03 361 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 HNRNPABQ99729 332 aaKnown RBP20.55■□□□□ 0.88
GTF3A-201ENST00000381140 SMOQ99835 787 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 FAM124BQ9H5Z6 455 aaPredicted RBP20.55■□□□□ 0.88
GTF3A-201ENST00000381140 ZFP37Q9Y6Q3 630 aaPredicted RBP20.55■□□□□ 0.88
GTF3A-201ENST00000381140 BDP1A6H8Y1 2624 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 BEST1O76090 585 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 CALCAP01258 141 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 ACO1P21399 889 aaKnown RBP20.54■□□□□ 0.88
GTF3A-201ENST00000381140 COPB1P53618 953 aaKnown RBP20.54■□□□□ 0.88
GTF3A-201ENST00000381140 MFAP3P55082 362 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 USP46P62068 366 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 POTEHQ6S545 545 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 GPIHBP1Q8IV16 184 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 RBBP8NLQ8NC74 664 aaPredicted RBP20.54■□□□□ 0.88
GTF3A-201ENST00000381140 ZSWIM3Q96MP5 696 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 KXD1Q9BQD3 176 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 LSM14BQ9BX40 385 aaKnown RBP20.54■□□□□ 0.88
GTF3A-201ENST00000381140 UXTQ9UBK9 157 aaPredicted RBP20.54■□□□□ 0.88
GTF3A-201ENST00000381140 APEX2Q9UBZ4 518 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 CUL9Q8IWT3 2517 aa20.54■□□□□ 0.88
GTF3A-201ENST00000381140 MICAL2O94851 1124 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 ATP1A3P13637 1013 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 ZNF18P17022 549 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 USP8P40818 1118 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 GOLGA7BQ2TAP0 167 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 SGO2Q562F6 1265 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 FKBP15Q5T1M5 1219 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 PARM1Q6UWI2 310 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 HSD3B7Q9H2F3 369 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 KCNK12Q9HB15 430 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 SIX2Q9NPC8 291 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 GDE1Q9NZC3 331 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 LIMA1Q9UHB6 759 aaKnown RBP20.53■□□□□ 0.88
GTF3A-201ENST00000381140 NUMBLQ9Y6R0 609 aa20.53■□□□□ 0.88
GTF3A-201ENST00000381140 RNF225M0QZC1 329 aaPredicted RBP20.52■□□□□ 0.88
GTF3A-201ENST00000381140 F11P03951 625 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 TPM4P67936 248 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 KCNMA1Q12791 1236 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 HTR4Q13639 388 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 PTPN21Q16825 1174 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 FAM78AQ5JUQ0 283 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 CLEC20AQ6ZU45 233 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 TMEM150AQ86TG1 271 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 NUP93Q8N1F7 819 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 ZMIZ2Q8NF64 920 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 ZSCAN18Q8TBC5 510 aaPredicted RBP20.52■□□□□ 0.88
GTF3A-201ENST00000381140 MRPS31Q92665 395 aaKnown RBP20.52■□□□□ 0.88
GTF3A-201ENST00000381140 FGF14Q92915 247 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 TRMT2BQ96GJ1 504 aaKnown RBP20.52■□□□□ 0.88
GTF3A-201ENST00000381140 SMOC2Q9H3U7 446 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 IGSF9Q9P2J2 1179 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 DNAJC12Q9UKB3 198 aa20.52■□□□□ 0.88
GTF3A-201ENST00000381140 AJAP1Q9UKB5 411 aaPredicted RBP20.52■□□□□ 0.88
GTF3A-201ENST00000381140 DCXO43602 365 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 ABL1P00519 1130 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 VDRP11473 427 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 NPR3P17342 541 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 BRD2P25440 801 aaKnown RBP20.51■□□□□ 0.87
GTF3A-201ENST00000381140 MTSS1LQ765P7 747 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 ENOSF1Q7L5Y1 443 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 SCAMP5Q8TAC9 235 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 MYRFLQ96LU7 910 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 CEP295NLQ96MC4 621 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 PCMTD1Q96MG8 357 aaPredicted RBP20.51■□□□□ 0.87
GTF3A-201ENST00000381140 RPP25Q9BUL9 199 aaKnown RBP20.51■□□□□ 0.87
GTF3A-201ENST00000381140 DUSP16Q9BY84 665 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 TRPC7Q9HCX4 862 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 EHD2Q9NZN4 543 aa20.51■□□□□ 0.87
GTF3A-201ENST00000381140 ANHXE9PGG2 379 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 TADA3O75528 432 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 RTN3O95197 1032 aaPredicted RBP20.5■□□□□ 0.87
GTF3A-201ENST00000381140 PAEPP09466 180 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 KLK7P49862 253 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 SLC5A3P53794 718 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 RAPGEF1Q13905 1077 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 ARHGAP17Q68EM7 881 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 TXNDC8Q6A555 127 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 MAB21L3Q8N8X9 362 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 TFAP2BQ92481 460 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 FAM81BQ96LP2 452 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 GPR88Q9GZN0 384 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 TASP1Q9H6P5 420 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 CSNK1G1Q9HCP0 422 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 HESX1Q9UBX0 185 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 TSPAN16Q9UKR8 245 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 SORCS3Q9UPU3 1222 aa20.5■□□□□ 0.87
GTF3A-201ENST00000381140 HELZP42694 1942 aaKnown RBP20.5■□□□□ 0.87
GTF3A-201ENST00000381140 LGALS16A8MUM7 142 aa20.49■□□□□ 0.87
GTF3A-201ENST00000381140 YWHAQP27348 245 aa20.49■□□□□ 0.87
GTF3A-201ENST00000381140 VIPR2P41587 438 aa20.49■□□□□ 0.87
GTF3A-201ENST00000381140 UBXN1Q04323 297 aa20.49■□□□□ 0.87
GTF3A-201ENST00000381140 TAF10Q12962 218 aa20.49■□□□□ 0.87
GTF3A-201ENST00000381140 TDGQ13569 410 aa20.49■□□□□ 0.87
GTF3A-201ENST00000381140 TANGO2Q6ICL3 276 aa20.49■□□□□ 0.87
GTF3A-201ENST00000381140 SARM1Q6SZW1 724 aa20.49■□□□□ 0.87
GTF3A-201ENST00000381140 GPRIN1Q7Z2K8 1008 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms