RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 DMAP1Q9NPF5 467 aaPredicted RBP13.4□□□□□ -0.26
SMN1-202ENST00000380707 HESX1Q9UBX0 185 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 H3BQ06 376 aaPredicted RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 M0QYV0 167 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 MMEP08473 750 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 HOXB8P17481 243 aaPredicted RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 CHRNB2P17787 502 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 CDC25BP30305 580 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 BCAT1P54687 386 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 EPHB3P54753 998 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 PDE4CQ08493 712 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 PLD1Q13393 1074 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 MTMR3Q13615 1198 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 CLUL1Q15846 466 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 ASIC2Q16515 512 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 SYN2Q92777 582 aaPredicted RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 SECISBP2LQ93073 1101 aaKnown RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 SPATA17Q96L03 361 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 NUCKS1Q9H1E3 243 aaKnown RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 S1PR5Q9H228 398 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 CDH22Q9UJ99 828 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 PCDHGC3Q9UN70 934 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 HHLA1C9JL84 531 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 TNFRSF10BO14763 440 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 MFAP3LO75121 409 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 TPM1P09493 284 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 CCDC172P0C7W6 258 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 SKILP12757 684 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 KCNA5P22460 613 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 ANXA13P27216 316 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 GPD2P43304 727 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 MRE11P49959 708 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 CDR2Q01850 454 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 BST2Q10589 180 aaKnown RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 GPRIN1Q7Z2K8 1008 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 DNAJB7Q7Z6W7 309 aaPredicted RBP13.39□□□□□ -0.27
SMN1-202ENST00000380707 ZNF677Q86XU0 584 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 PASD1Q8IV76 773 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 FMNL3Q8IVF7 1028 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 DRC7Q8IY82 874 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 WDTC1Q8N5D0 677 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 OR8K1Q8NGG5 319 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 SLC35F5Q8WV83 523 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 HLA-CQ95604 372 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 PSMG2Q969U7 264 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 CYTH4Q9UIA0 394 aa13.39□□□□□ -0.27
SMN1-202ENST00000380707 SLC38A8A6NNN8 435 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 AKR1B15C9JRZ8 316 aaPredicted RBP13.38□□□□□ -0.27
SMN1-202ENST00000380707 XPO1O14980 1071 aaKnown RBP13.38□□□□□ -0.27
SMN1-202ENST00000380707 XYLBO75191 536 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 POU2F2P09086 479 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 HMGA1P17096 107 aaKnown RBP13.38□□□□□ -0.27
SMN1-202ENST00000380707 HNRNPH3P31942 346 aaKnown RBP13.38□□□□□ -0.27
SMN1-202ENST00000380707 PRKCIP41743 596 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 SLC8A3P57103 927 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 USP46P62068 366 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 FMO1Q01740 532 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 ARID5BQ14865 1188 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 MEA1Q16626 185 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 PMF1Q6P1K2 205 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 DENND5BQ6ZUT9 1274 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.38□□□□□ -0.27
SMN1-202ENST00000380707 GPR149Q86SP6 731 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 PIGZQ86VD9 579 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 ELMOD1Q8N336 334 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 TC2NQ8N9U0 490 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 SPC24Q8NBT2 197 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 SMRP1Q8NCR6 262 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 SMG7Q92540 1137 aaKnown RBP13.38□□□□□ -0.27
SMN1-202ENST00000380707 ZNF512Q96ME7 567 aaPredicted RBP13.38□□□□□ -0.27
SMN1-202ENST00000380707 AGPAT1Q99943 283 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 SYT11Q9BT88 431 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 UBXN6Q9BZV1 441 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 LHX5Q9H2C1 402 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 PRDM6Q9NQX0 595 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 ABHD10Q9NUJ1 306 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 DNMT3BQ9UBC3 853 aaKnown RBP13.38□□□□□ -0.27
SMN1-202ENST00000380707 ASB3Q9Y575 518 aa13.38□□□□□ -0.27
SMN1-202ENST00000380707 MYH10P35580 1976 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 FAM170AA1A519 330 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 GABBR2O75899 941 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 PLEKP08567 350 aaPredicted RBP13.37□□□□□ -0.27
SMN1-202ENST00000380707 SETSIPP0DME0 302 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 PLA2G4AP47712 749 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 SLC5A3P53794 718 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 ITIH3Q06033 890 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 KLHL30Q0D2K2 578 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 VEPH1Q14D04 833 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 ZNF571Q7Z3V5 609 aaPredicted RBP13.37□□□□□ -0.27
SMN1-202ENST00000380707 GRASPQ7Z6J2 395 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms