RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 DUX4L3P0CJ86 424 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DUX4L4P0CJ87 422 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DUX4L5P0CJ88 424 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DUX4L6P0CJ89 424 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DUX4L7P0CJ90 424 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ERVK-10P10266 1014 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CCR1P32246 355 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 KRT20P35900 424 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 FLOT2Q14254 428 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 LMBRD2Q68DH5 695 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TLK2Q86UE8 772 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ZNF655Q8N720 491 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 REPS2Q8NFH8 660 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 MAGEC3Q8TD91 643 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CDCA5Q96FF9 252 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SMARCD1Q96GM5 515 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 RBM15Q96T37 977 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 APBA2Q99767 749 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TRABDQ9H4I3 376 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 EPB41L4AQ9HCS5 686 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 C20orf96Q9NUD7 363 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DUX4Q9UBX2 424 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 APPL1Q9UKG1 709 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TRIM17Q9Y577 477 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 WDR91A4D1P6 747 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TADA3O75528 432 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 FGFR2P21802 821 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 POU4F1Q01851 419 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 RGMBQ6NW40 437 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SLFN11Q7Z7L1 901 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CATSPER3Q86XQ3 398 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 EXD1Q8NHP7 514 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 LENG9Q96B70 501 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 WDR18Q9BV38 432 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 LRRC40Q9H9A6 602 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 AGO4Q9HCK5 861 aaKnown RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SCUBE2Q9NQ36 999 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 FAM49BQ9NUQ9 324 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 WWOXQ9NZC7 414 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 POLLQ9UGP5 575 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TRHDEQ9UKU6 1024 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TTC7AQ9ULT0 858 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TMCO1Q9UM00 188 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 NRCAMQ92823 1304 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 NEURL4Q96JN8 1562 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 M0QYT0 321 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ACKR2O00590 384 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SRP72O76094 671 aaKnown RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 IGSF6O95976 241 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ACO1P21399 889 aaKnown RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 KCNK10P57789 538 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 FSCN1Q16658 493 aaKnown RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 AGBL2Q5U5Z8 902 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TRIM68Q6AZZ1 485 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 NFRKBQ6P4R8 1299 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 UNC93AQ86WB7 457 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ZNF555Q8NEP9 628 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SLC35G2Q8TBE7 412 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CASP10Q92851 521 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ZKSCAN4Q969J2 545 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CLMNQ96JQ2 1002 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SYT15Q9BQS2 421 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TRIM4Q9C037 500 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DMAP1Q9NPF5 467 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ADA2Q9NZK5 511 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 XPO7Q9UIA9 1087 aaKnown RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 VPS28Q9UK41 221 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CRYL1Q9Y2S2 319 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 PP2D1A8MPX8 630 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 PRMT3O60678 531 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CHRM3P20309 590 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 KLRC2P26717 231 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 HALP42357 657 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 C1orf146Q5VVC0 180 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CEP70Q8NHQ1 597 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DDI1Q8WTU0 396 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CPA4Q9UI42 421 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ZNF510Q9Y2H8 683 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 GMNCA6NCL1 334 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 TBKBP1A7MCY6 615 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 SUPT3HB4E1H0 165 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 POMCP01189 267 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 SERPIND1P05546 499 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 SP3Q02447 781 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 PRKAA1Q13131 559 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 STX5Q13190 355 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 NAB1Q13506 487 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 HABP4Q5JVS0 413 aaKnown RBP7.43□□□□□ -1.22
CCDC171-201ENST00000380701 SPDYAQ5MJ70 313 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 FAM47EQ6ZV65 393 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 OLFM3Q96PB7 478 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 TGS1Q96RS0 853 aaKnown RBP7.43□□□□□ -1.22
CCDC171-201ENST00000380701 ABCB6Q9NP58 842 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 C6orf203Q9P0P8 240 aaPredicted RBP7.43□□□□□ -1.22
CCDC171-201ENST00000380701 FBXL21Q9UKT6 434 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 CDYLQ9Y232 598 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 STARD13Q9Y3M8 1113 aa7.43□□□□□ -1.22
CCDC171-201ENST00000380701 NEU2Q9Y3R4 380 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms