RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ERBB2P04626 1255 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 RBP3P10745 1247 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 CDH8P55286 799 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 SLC8A3P57103 927 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 ZNF449Q6P9G9 518 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 DARS2Q6PI48 645 aaKnown RBP17.08■□□□□ 0.32
VPS16-203ENST00000380469 EEPD1Q7L9B9 569 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 NLRP9Q7RTR0 991 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 RIOX2Q8IUF8 465 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 BANPQ8N9N5 519 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 SPATA18Q8TC71 538 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 BCO2Q9BYV7 579 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 INO80BQ9C086 356 aaPredicted RBP17.08■□□□□ 0.32
VPS16-203ENST00000380469 MANSC1Q9H8J5 431 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 PTPRHQ9HD43 1115 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 USP18Q9UMW8 372 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 GOLGA8RI6L899 631 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
VPS16-203ENST00000380469 TMEM63AO94886 807 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 STIP1P31948 543 aaKnown RBP17.07■□□□□ 0.32
VPS16-203ENST00000380469 ROR1Q01973 937 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 TAF1BQ53T94 588 aaPredicted RBP17.07■□□□□ 0.32
VPS16-203ENST00000380469 SH3D19Q5HYK7 790 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 NOL9Q5SY16 702 aaKnown RBP17.07■□□□□ 0.32
VPS16-203ENST00000380469 LBX2Q6XYB7 198 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 LONP2Q86WA8 852 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 NCAPG2Q86XI2 1143 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 MZB1Q8WU39 189 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 PIAS1O75925 651 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 T-ENOLP0DO92 83 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 FGFR1P11362 822 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 PTPN11Q06124 597 aaPredicted RBP17.07■□□□□ 0.32
VPS16-203ENST00000380469 ORC1Q13415 861 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 CRYMQ14894 314 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 NAA25Q14CX7 972 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 DHX37Q8IY37 1157 aaKnown RBP17.07■□□□□ 0.32
VPS16-203ENST00000380469 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 FAXDC2Q96IV6 333 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 NLRP4Q96MN2 994 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 ADPGKQ9BRR6 497 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 WDR83Q9BRX9 315 aaKnown RBP17.07■□□□□ 0.32
VPS16-203ENST00000380469 SAR1AQ9NR31 198 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 CHMP2BQ9UQN3 213 aa17.07■□□□□ 0.32
VPS16-203ENST00000380469 IGKV6-21A0A0C4DH24 114 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 LOC285556D6RIA3 1793 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 PEX10O60683 326 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 LPXNO60711 386 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 MICAL2O94851 1124 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
VPS16-203ENST00000380469 MTM1Q13496 603 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 TAF5Q15542 800 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 MTDHQ86UE4 582 aaKnown RBP17.06■□□□□ 0.32
VPS16-203ENST00000380469 CEP120Q8N960 986 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 SLC4A11Q8NBS3 891 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 MCRS1Q96EZ8 462 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 KLF6Q99612 283 aaPredicted RBP17.06■□□□□ 0.32
VPS16-203ENST00000380469 TBC1D10AQ9BXI6 508 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 FZD8Q9H461 694 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 BTBD7Q9P203 1132 aa17.06■□□□□ 0.32
VPS16-203ENST00000380469 HNRNPCL1O60812 293 aaKnown RBP17.05■□□□□ 0.32
VPS16-203ENST00000380469 CXCL8P10145 99 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 ELK3P41970 407 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 GABRB2P47870 512 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 PRKG1Q13976 671 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 PLPPR4Q7Z2D5 763 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 CDR2LQ86X02 465 aaPredicted RBP17.05■□□□□ 0.32
VPS16-203ENST00000380469 SLC7A6OSQ96CW6 309 aaPredicted RBP17.05■□□□□ 0.32
VPS16-203ENST00000380469 TMEM176AQ96HP8 235 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 ZNF668Q96K58 619 aaPredicted RBP17.05■□□□□ 0.32
VPS16-203ENST00000380469 MPHOSPH6Q99547 160 aaKnown RBP17.05■□□□□ 0.32
VPS16-203ENST00000380469 GPR20Q99678 358 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 BATF3Q9NR55 127 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 SLC17A7Q9P2U7 560 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 SIX4Q9UIU6 781 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 SSC5DA1L4H1 1573 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 ZBTB42B2RXF5 422 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 M0QYV0 167 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 B4GALT5O43286 388 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 CBX6O95503 412 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 INHBAP08476 426 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 PTPN4P29074 926 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 PCK1P35558 622 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 ZNF200P98182 395 aaPredicted RBP17.05■□□□□ 0.32
VPS16-203ENST00000380469 PTK7Q13308 1070 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 TFDP2Q14188 446 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 TREML2Q5T2D2 321 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 FAM102AQ5T9C2 384 aaPredicted RBP17.05■□□□□ 0.32
VPS16-203ENST00000380469 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 TRIM50Q86XT4 487 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 MAB21L3Q8N8X9 362 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 SDCBP2Q9H190 292 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 SMYD3Q9H7B4 428 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 DCTN4Q9UJW0 460 aa17.05■□□□□ 0.32
VPS16-203ENST00000380469 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.04■□□□□ 0.32
VPS16-203ENST00000380469 TRAFD1O14545 582 aaPredicted RBP17.04■□□□□ 0.32
VPS16-203ENST00000380469 LGR5O75473 907 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 SPAG6O75602 509 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 NEFHP12036 1026 aa17.04■□□□□ 0.32
VPS16-203ENST00000380469 P4HA1P13674 534 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms