RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 MTRF1LQ9UGC7 380 aaKnown RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 SQORQ9Y6N5 450 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 FAM25EA8MYX2 175 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 GYG2O15488 501 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 TYROBPO43914 113 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 HAUS5O94927 633 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 PRKCAP17252 672 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 TBXAS1P24557 533 aaPredicted RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 UBE4AQ14139 1066 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 KRT81Q14533 505 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 CYP2A13Q16696 494 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 SLX4IPQ5VYV7 408 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 LPCAT4Q643R3 524 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 LLGL2Q6P1M3 1020 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 TTC27Q6P3X3 843 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 CCBE1Q6UXH8 406 aaPredicted RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 CYFIP1Q7L576 1253 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 ADAT2Q7Z6V5 191 aaKnown RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 RAVER1Q8IY67 606 aaKnown RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 CPXCR1Q8N123 301 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 C4orf32Q8N8J7 132 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 SLC44A5Q8NCS7 719 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 SLCO2A1Q92959 643 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 FAR2Q96K12 515 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 STRBPQ96SI9 672 aaKnown RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 GOLPH3Q9H4A6 298 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 SCUBE2Q9NQ36 999 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 POU2F3Q9UKI9 436 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 PCDHA12Q9UN75 941 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 EMSYQ7Z589 1322 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 FAM47DPA6NHR8 397 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 SLC26A4O43511 780 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 IL9RQ01113 521 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 LRRC63Q05C16 580 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 PPATQ06203 517 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 DPYSQ14117 519 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 GK3PQ14409 553 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 COG2Q14746 738 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 RABL6Q3YEC7 729 aaPredicted RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 OGFOD2Q6N063 350 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 ALKBH2Q6NS38 261 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 DPH6Q7L8W6 267 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 ATG9AQ7Z3C6 839 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 TMEM126BQ8IUX1 230 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 BLIDQ8IZY5 108 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 HSPH1Q92598 858 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 TTC9Q92623 222 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 USP6NLQ92738 828 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 EYA3Q99504 573 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 LBHD1Q9BQE6 289 aaPredicted RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 DCLK3Q9C098 648 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 GLT8D2Q9H1C3 349 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 LIN28AQ9H9Z2 209 aaKnown RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 UBN1Q9NPG3 1134 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 GPRC5DQ9NZD1 345 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 ARMCX3Q9UH62 379 aaPredicted RBP6.86□□□□□ -1.31
RIPK1-202ENST00000380409 TMCC3Q9ULS5 477 aa6.86□□□□□ -1.31
RIPK1-202ENST00000380409 SF3B1O75533 1304 aaKnown RBP eCLIP6.85□□□□□ -1.313e-9■■■■■ 206.8
RIPK1-202ENST00000380409 GOLGA8MH3BSY2 632 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CCNT2O60583 730 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CHEK2O96017 543 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 HSPA1AP0DMV8 641 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 HSPA1BP0DMV9 641 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 PRDX5P30044 214 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SLC5A3P53794 718 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 NCKAP1LP55160 1127 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 BASP1P80723 227 aaKnown RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SIX1Q15475 284 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 HSF5Q4G112 596 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CENPPQ6IPU0 288 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 USP17L2Q6R6M4 530 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 LRRC55Q6ZSA7 311 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 NATD1Q8N6N6 113 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 ANKRD42Q8N9B4 389 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 RFWD2Q8NHY2 731 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 ZUFSPQ96AP4 578 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 TTC25Q96NG3 672 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 OSBPL8Q9BZF1 889 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 EPB41L4AQ9HCS5 686 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 C6orf203Q9P0P8 240 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 POLIQ9UNA4 740 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 PCDHB13Q9Y5F0 798 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 A0A1B0GTW7 788 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 SORBS3O60504 671 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 CAMTA2O94983 1202 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 ZBTB11O95625 1053 aaPredicted RBP6.85□□□□□ -1.31
RIPK1-202ENST00000380409 PLTPP55058 493 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 P2RX3P56373 397 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 FOXO4P98177 505 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 NIPAL4Q0D2K0 466 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 NPTX1Q15818 432 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 MMEL1Q495T6 779 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 PGM2L1Q6PCE3 622 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 TRABD2AQ86V40 505 aa6.85□□□□□ -1.31
RIPK1-202ENST00000380409 TMPRSS6Q8IU80 811 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms