RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 EPC1Q9H2F5 836 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 ARHGEF3Q9NR81 526 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 VTI1BQ9UEU0 232 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 KATNA1O75449 491 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 HSPA9P38646 679 aaKnown RBP14.62□□□□□ -0.07
TRIM13-202ENST00000378182 FAM171A1Q5VUB5 890 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 GMNCA6NCL1 334 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 CSF1RP07333 972 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 PDHBP11177 359 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 CENPLQ8N0S6 344 aaPredicted RBP14.62□□□□□ -0.07
TRIM13-202ENST00000378182 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRIM13-202ENST00000378182 THTPAQ9BU02 230 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 SETD4Q9NVD3 440 aa14.62□□□□□ -0.07
TRIM13-202ENST00000378182 KRT33AO76009 404 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 TGM2P21980 687 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 SERPINB10P48595 397 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 SCNN1BP51168 640 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 KIAA1324Q6UXG2 1013 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 UXS1Q8NBZ7 420 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 RDM1Q8NG50 284 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 NCAPD2Q15021 1401 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 SOAT2O75908 522 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 FLT3P36888 993 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 CLK2P49760 499 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 STYK1Q6J9G0 422 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 NEDD1Q8NHV4 660 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 APOL2Q9BQE5 337 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 GPRC5CQ9NQ84 441 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 MIEF1Q9NQG6 463 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 SCAMP3O14828 347 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 HNRNPCP07910 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 SNAP47Q5SQN1 464 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 EMBQ6PCB8 327 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 DET1Q7L5Y6 550 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 PRPF39Q86UA1 669 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 ZNF579Q8NAF0 562 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 FAM151AQ8WW52 585 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 SLC9A8Q9Y2E8 581 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 PCDHB9Q9Y5E1 797 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 RPRD1BQ9NQG5 326 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 NMRK1Q9NWW6 199 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 ATP6V1HQ9UI12 483 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 EIF3LQ9Y262 564 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 ZNF711Q9Y462 761 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 IGSF9BQ9UPX0 1349 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 NRKQ7Z2Y5 1582 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 BYSLQ13895 437 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 CEP68Q76N32 757 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 PCYOX1LQ8NBM8 494 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 MTERF3Q96E29 417 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 NLNQ9BYT8 704 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 REXO4Q9GZR2 422 aaKnown RBP14.61□□□□□ -0.07
TRIM13-202ENST00000378182 CLPBQ9H078 707 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 RNF19AQ9NV58 838 aa14.61□□□□□ -0.07
TRIM13-202ENST00000378182 GMFGO60234 142 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 CHGBP05060 677 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 TAL1P17542 331 aaPredicted RBP14.6□□□□□ -0.07
TRIM13-202ENST00000378182 NOS3P29474 1203 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 TAF13Q15543 124 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 CHI3L2Q15782 390 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 UGP2Q16851 508 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 TNIP2Q8NFZ5 429 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 CNBD2Q96M20 576 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 OSBPL1AQ9BXW6 950 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 STK33Q9BYT3 514 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 SNTG2Q9NY99 539 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 CHUKO15111 745 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 MSH4O15457 936 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 CST8O60676 142 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 SPRP35270 261 aaPredicted RBP14.6□□□□□ -0.07
TRIM13-202ENST00000378182 SETD3Q86TU7 594 aaPredicted RBP14.6□□□□□ -0.07
TRIM13-202ENST00000378182 LONP2Q86WA8 852 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 EME1Q96AY2 570 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 C9orf72Q96LT7 481 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 TLR8Q9NR97 1041 aaKnown RBP14.6□□□□□ -0.07
TRIM13-202ENST00000378182 RGS5O15539 181 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 SERPINB3P29508 390 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 PNPLA4P41247 253 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 IARS2Q9NSE4 1012 aaKnown RBP14.6□□□□□ -0.07
TRIM13-202ENST00000378182 RIC8BQ9NVN3 520 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 WDR35Q9P2L0 1181 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 FAM205CA6NFA0 338 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 ACTN3Q08043 901 aaPredicted RBP14.6□□□□□ -0.07
TRIM13-202ENST00000378182 MYO1HQ8N1T3 1032 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 EDEM1Q92611 657 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 RBM15Q96T37 977 aaKnown RBP eCLIP14.6□□□□□ -0.073e-6■■■■□ 20.5
TRIM13-202ENST00000378182 HOXA2O43364 376 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 PLA2G6O60733 806 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 CACHD1Q5VU97 1274 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 C16orf89Q6UX73 402 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 ADI1Q9BV57 179 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 GHRP10912 638 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 SERPINB5P36952 375 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 TMEM154Q6P9G4 183 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 WWP1Q9H0M0 922 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 CAAP1Q9H8G2 361 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 SPG21Q9NZD8 308 aa14.6□□□□□ -0.07
TRIM13-202ENST00000378182 USP13Q92995 863 aaPredicted RBP14.59□□□□□ -0.07
TRIM13-202ENST00000378182 ELMO3Q96BJ8 720 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 NFIBO00712 420 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms