RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 TMEM120BA0PK00 339 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 SRRM3A6NNA2 597 aaPredicted RBP20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 ITGAVP06756 1048 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 CYP2C9P11712 490 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 MAGEA9P43362 315 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 KYAT1Q16773 422 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 SPRYD7Q5W111 196 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 IQSEC1Q6DN90 963 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 SCUBE3Q8IX30 993 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 LRRC34Q8IZ02 419 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 ZBED8Q8IZ13 594 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 C7orf31Q8N865 590 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 NKD2Q969F2 451 aaPredicted RBP20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 TRIM6Q9C030 488 aaPredicted RBP20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 DPEP3Q9H4B8 488 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 GPATCH2LQ9NWQ4 482 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 FLRT1Q9NZU1 646 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 GPD1P21695 349 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 YARSP54577 528 aaKnown RBP20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 ANKRD22Q5VYY1 191 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 SLC27A1Q6PCB7 646 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 LCLAT1Q6UWP7 414 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 UNC45BQ8IWX7 931 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 SRRM1Q8IYB3 904 aaKnown RBP20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 OR6B3Q8NGW1 331 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 DYDC1Q8WWB3 177 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 CENPTQ96BT3 561 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 CABS1Q96KC9 395 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 B3GNT5Q9BYG0 378 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 MIS12Q9H081 205 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 ASNSD1Q9NWL6 643 aa20.18■□□□□ 0.82
PCDHA4-201ENST00000378125 POC1B-GALNT4F8VUJ3 575 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 PIAS1O75925 651 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 VIMP08670 466 aaKnown RBP20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 PDGFRBP09619 1106 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 CDH6P55285 790 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 TMED2Q15363 201 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 FAM110CQ1W6H9 321 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 RNASEH2BQ5TBB1 312 aaKnown RBP20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 VSTM1Q6UX27 236 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 MICALCLQ6ZW33 695 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 ZC3H18Q86VM9 953 aaKnown RBP20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 TTC30AQ86WT1 665 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 GDAP1Q8TB36 358 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 CCHCR1Q8TD31 782 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 TMEM40Q8WWA1 233 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 RSAD2Q8WXG1 361 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 KAT2BQ92831 832 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 ZNF317Q96PQ6 595 aaPredicted RBP20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 VPS37BQ9H9H4 285 aa20.17■□□□□ 0.82
PCDHA4-201ENST00000378125 MAP3K6O95382 1288 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 CTCFP49711 727 aaPredicted RBP20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 ZNF143P52747 638 aaPredicted RBP20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 BEX3Q00994 111 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 PDIA2Q13087 525 aaKnown RBP20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 CCL14Q16627 93 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 DCAF4L1Q3SXM0 396 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 OLFML2BQ68BL8 750 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 BBS12Q6ZW61 710 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 CCDC13Q8IYE1 715 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 FAM71DQ8N9W8 422 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 LRRN4Q8WUT4 740 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 SNX27Q96L92 541 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 A0A087WUV0 522 aaPredicted RBP20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 ATP2C2O75185 946 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 RECQL4O94761 1208 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 BRAFP15056 766 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 MPP2Q14168 576 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 GKAP1Q5VSY0 366 aaPredicted RBP20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 TADA2BQ86TJ2 420 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 C2orf69Q8N8R5 385 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 FAXDC2Q96IV6 333 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 RNF39Q9H2S5 420 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 GOLGA2P5Q9HBQ8 144 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 PCDH9Q9HC56 1237 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 NGRNQ9NPE2 291 aaKnown RBP20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 PIN4Q9Y237 131 aaKnown RBP20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 DOCK3Q8IZD9 2030 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 SCN4AP35499 1836 aa20.16■□□□□ 0.82
PCDHA4-201ENST00000378125 EXOC1LA0A1B0GW35 172 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 C2CD4BA6NLJ0 364 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 HOXD8P13378 290 aaPredicted RBP20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 GSCP56915 257 aaPredicted RBP20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 EIF3EP60228 445 aaKnown RBP20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 C1orf228Q6PIY5 440 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 CACNA2D3Q8IZS8 1091 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 PRCCQ92733 491 aaPredicted RBP20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 TCRBV7S3A2A0A539 114 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 TREHO43280 583 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 RPL22P35268 128 aaKnown RBP20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 MORF4L2Q15014 288 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 ZC3H12AQ5D1E8 599 aaKnown RBP20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 ZNF618Q5T7W0 954 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 NOTUMQ6P988 496 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 TLK2Q86UE8 772 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 CMASQ8NFW8 434 aaPredicted RBP20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 SPATA18Q8TC71 538 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 CCDC77Q9BR77 488 aa20.15■□□□□ 0.82
PCDHA4-201ENST00000378125 MAK16Q9BXY0 300 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms