RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 TGM2P21980 687 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 RGS2P41220 211 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 SP8Q8IXZ3 490 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 SOHLH2Q9NX45 425 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 ERAP1Q9NZ08 941 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 LRRIQ3A6PVS8 624 aaPredicted RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 M0R3G1 203 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 KRT33AO76009 404 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 RRM2P31350 389 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 CYP2C19P33261 490 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 CASP4P49662 377 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 TPGS1Q6ZTW0 290 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 CCDC149Q6ZUS6 474 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 RFFLQ8WZ73 363 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 PRPF18Q99633 342 aaKnown RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 TEX13BQ9BXU2 312 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 ZMYM5Q9UJ78 669 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 CST8O60676 142 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 EIF2S1P05198 315 aaKnown RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 EPHB3P54753 998 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 CUL4AQ13619 759 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 TAF5Q15542 800 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 MARK2Q7KZI7 788 aaKnown RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 TMC2Q8TDI7 906 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 GPRC5CQ9NQ84 441 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 CYP39A1Q9NYL5 469 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 SH3BP4Q9P0V3 963 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 EIF3LQ9Y262 564 aaKnown RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 GSG1L2A8MUP6 293 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 NDUFS2O75306 463 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 DEAF1O75398 565 aaPredicted RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 NDUFB10O96000 172 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 NPEPPSP55786 919 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 MICU2Q8IYU8 434 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 DNAJC1Q96KC8 554 aaKnown RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 ADI1Q9BV57 179 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 GALNT8Q9NY28 637 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 VPS26AO75436 327 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 DMTNQ08495 405 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 COX10Q12887 443 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 BYSLQ13895 437 aaKnown RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 PDIA6Q15084 440 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 ZNF284Q2VY69 593 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 ATP6V1G3Q96LB4 118 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 SH3GL3Q99963 347 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 ERI2A8K979 691 aaKnown RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 CLCN3P51790 818 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 SOX10P56693 466 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 PIGHQ14442 188 aaPredicted RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 EDEM1Q92611 657 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 STARD7Q9NQZ5 370 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 LCMT1Q9UIC8 334 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 FICDQ9BVA6 458 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 TARS2Q9BW92 718 aaKnown RBP16.9■□□□□ 0.3
RGP1-201ENST00000378078 KLHL20Q9Y2M5 609 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 COQ6Q9Y2Z9 468 aa16.9■□□□□ 0.3
RGP1-201ENST00000378078 PIPSLA2A3N6 862 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 ITGA8P53708 1063 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 EPHX4Q8IUS5 362 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 ATG4CQ96DT6 458 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 OLFM1Q99784 485 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 ZNF304Q9HCX3 659 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 MIEF1Q9NQG6 463 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 AGPAT5Q9NUQ2 364 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.89■□□□□ 0.29
RGP1-201ENST00000378078 PHF2O75151 1096 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 TARSP26639 723 aaKnown RBP16.89■□□□□ 0.29
RGP1-201ENST00000378078 PCSK1P29120 753 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 FMO5P49326 533 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 ZSWIM7Q19AV6 140 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 XKR3Q5GH77 459 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 FRMD5Q7Z6J6 570 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 PCYOX1LQ8NBM8 494 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 OSBPL5Q9H0X9 879 aaPredicted RBP16.89■□□□□ 0.29
RGP1-201ENST00000378078 TCEA1P23193 301 aaKnown RBP16.89■□□□□ 0.29
RGP1-201ENST00000378078 LPIN1Q14693 890 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 SLC25A24Q6NUK1 477 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 UGT3A1Q6NUS8 523 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 NECTIN1Q15223 517 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
RGP1-201ENST00000378078 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 AP3M2P53677 418 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 ENOSF1Q7L5Y1 443 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 VPS37AQ8NEZ2 397 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 OPTNQ96CV9 577 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 RHOBTB2Q9BYZ6 727 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 DEFB129Q9H1M3 183 aa16.89■□□□□ 0.29
RGP1-201ENST00000378078 PDZK1P1A8MUH7 402 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 H7C4K7 107 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 TK2O00142 265 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 GRIN3BO60391 1043 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 PLA2G6O60733 806 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 MSH3P20585 1137 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 GARTP22102 1010 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 GALCP54803 685 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 OXCT1P55809 520 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 NBPF9Q3BBW0 867 aa16.88■□□□□ 0.29
RGP1-201ENST00000378078 CACHD1Q5VU97 1274 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms