RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 GCNAQ96QF7 691 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 DHRS4Q9BTZ2 278 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 C20orf27Q9GZN8 174 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 IP6K2Q9UHH9 426 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 HNRNPDLO14979 420 aaKnown RBP16.56■□□□□ 0.24
CKAP4-201ENST00000378026 TOP3BO95985 862 aaKnown RBP16.56■□□□□ 0.24
CKAP4-201ENST00000378026 ASLP04424 464 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 UQCRBP14927 111 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 ITGB5P18084 799 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 BPIFB4P59827 614 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 OGDHQ02218 1023 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 GCNT1Q02742 428 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 MAP3K10Q02779 954 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 PDK3Q15120 406 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 UGCGQ16739 394 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 DNAL1Q4LDG9 190 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 TCHHL1Q5QJ38 904 aaPredicted RBP16.56■□□□□ 0.24
CKAP4-201ENST00000378026 CHSY1Q86X52 802 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 UNC45BQ8IWX7 931 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 FAM172AQ8WUF8 416 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 APOL6Q9BWW8 343 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 KCNH7Q9NS40 1196 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 PARVAQ9NVD7 372 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 KCNK4Q9NYG8 393 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 IL1RAPL1Q9NZN1 696 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 PACSIN3Q9UKS6 424 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 DRG1Q9Y295 367 aaKnown RBP16.56■□□□□ 0.24
CKAP4-201ENST00000378026 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 A0A088AWK7 358 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 CST8O60676 142 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 ITGA2BP08514 1039 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 ATP6V1B1P15313 513 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 STAT2P52630 851 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 ZNF252P-AS1Q0IIN9 211 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 EFHC1Q5JVL4 640 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 RBM44Q6ZP01 1051 aaKnown RBP16.56■□□□□ 0.24
CKAP4-201ENST00000378026 NUDCD3Q8IVD9 361 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 NAT8LQ8N9F0 302 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 PHF12Q96QT6 1004 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 MMP19Q99542 508 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 KLHL4Q9C0H6 718 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 WWP1Q9H0M0 922 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 NPTX2P47972 431 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 SLC39A4Q6P5W5 647 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 DENND5BQ6ZUT9 1274 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 SH3BP5LQ7L8J4 393 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 SDCCAG8Q86SQ7 713 aaPredicted RBP16.56■□□□□ 0.24
CKAP4-201ENST00000378026 ABRAQ8N0Z2 381 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 AGBL1Q96MI9 1066 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 MIS12Q9H081 205 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 ZNRF3Q9ULT6 936 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 SCINQ9Y6U3 715 aa16.56■□□□□ 0.24
CKAP4-201ENST00000378026 LOC100653049A0A140TA62 436 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 KRT34O76011 436 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 HLA-DRAP01903 254 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 ITGAVP06756 1048 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 WEE2P0C1S8 567 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 BTKQ06187 659 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 SPP2Q13103 211 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 RABGAP1LQ5R372 815 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 SNRNP27Q8WVK2 155 aaKnown RBP16.55■□□□□ 0.24
CKAP4-201ENST00000378026 LENG1Q96BZ8 264 aaPredicted RBP16.55■□□□□ 0.24
CKAP4-201ENST00000378026 TMEM165Q9HC07 324 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 KMT5AQ9NQR1 393 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 PI4KBQ9UBF8 816 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 TMCO1Q9UM00 188 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 EXOC7Q9UPT5 735 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 MYOCOSA0A1B0GUC4 107 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 PMM2O15305 246 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 CDKN2BP42772 138 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 WNT7BP56706 349 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 CYP4A22Q5TCH4 519 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 TMCO4Q5TGY1 634 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 FBXL19Q6PCT2 694 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 TMEM179Q6ZVK1 233 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 CRLF3Q8IUI8 442 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 TMEM161BQ8NDZ6 487 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
CKAP4-201ENST00000378026 CNTN3Q9P232 1028 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 HSFX1Q9UBD0 423 aa16.55■□□□□ 0.24
CKAP4-201ENST00000378026 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 FKBP6O75344 327 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 ZMPSTE24O75844 475 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 PROCP04070 461 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 STIP1P31948 543 aaKnown RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 QARSP47897 775 aaKnown RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 ACOT2P49753 483 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 SCARA3Q6AZY7 606 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 DRICH1Q6PGQ1 229 aaPredicted RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 PCGF5Q86SE9 256 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 STKLD1Q8NE28 680 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 PPP1R14CQ8TAE6 165 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 GMCL1Q96IK5 515 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 CCDC106Q9BWC9 280 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 ZC3H12CQ9C0D7 883 aaKnown RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 SOX13Q9UN79 622 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 UGT1A9O60656 530 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms