RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 GLIS3Q8NEA6 775 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 PKMYT1Q99640 499 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 C2orf49Q9BVC5 232 aaPredicted RBP10.29□□□□□ -0.76
C9orf85-202ENST00000377027 OXCT2Q9BYC2 517 aaPredicted RBP10.29□□□□□ -0.76
C9orf85-202ENST00000377027 ZHX3Q9H4I2 956 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 SLITRK6Q9H5Y7 841 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 ASB7Q9H672 318 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 DPP3Q9NY33 737 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 GTSE1Q9NYZ3 720 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 TBC1D7Q9P0N9 293 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 AGO2Q9UKV8 859 aaKnown RBP10.29□□□□□ -0.76
C9orf85-202ENST00000377027 CCL26Q9Y258 94 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 PTPRJQ12913 1337 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 SPAG17Q6Q759 2223 aa10.29□□□□□ -0.76
C9orf85-202ENST00000377027 FRMD3A2A2Y4 597 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 VPS37CA5D8V6 355 aaPredicted RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 SPECC1L-ADORA2AF8WAN1 911 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 MAN2B1O00754 1011 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 CYB561D2O14569 222 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 XPOTO43592 962 aaKnown RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 TBCAO75347 108 aaKnown RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 HAPLN1P10915 354 aaPredicted RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 SCP2P22307 547 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 EPHB3P54753 998 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 MLLT6P55198 1093 aaPredicted RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 PLD1Q13393 1074 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 CCINQ13939 588 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 UBAP2LQ14157 1087 aaKnown RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 LPAL2Q16609 132 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 KYAT1Q16773 422 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 SWI5Q1ZZU3 235 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 ARSJQ5FYB0 599 aaPredicted RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 EFHC2Q5JST6 749 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 GPR158Q5T848 1215 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 TMEM164Q5U3C3 297 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 NAIF1Q69YI7 327 aaPredicted RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 CD302Q8IX05 232 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 GIPC2Q8TF65 315 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 SAAL1Q96ER3 474 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 TSPAN18Q96SJ8 248 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 SEPT5Q99719 369 aaPredicted RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 PYM1Q9BRP8 204 aaKnown RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 SLC46A2Q9BY10 475 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 ATXN3LQ9H3M9 355 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 HPS4Q9NQG7 708 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 HSFX1Q9UBD0 423 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 SIX4Q9UIU6 781 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 L1RE1Q9UN81 338 aa10.28□□□□□ -0.76
C9orf85-202ENST00000377027 MRPS17Q9Y2R5 130 aaKnown RBP10.28□□□□□ -0.76
C9orf85-202ENST00000377027 CFAP47Q6ZTR5 3102 aa10.27□□□□□ -0.76
C9orf85-202ENST00000377027 A0A1W2PNR3 127 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 NCAM2O15394 837 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 BMP15O95972 392 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 KRT18P05783 430 aaKnown RBP10.27□□□□□ -0.77
C9orf85-202ENST00000377027 HOXD13P35453 343 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 ALDH1A3P47895 512 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 MCM2P49736 904 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 TAF6P49848 677 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 MGAT5BQ3V5L5 792 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 RNFT1Q5M7Z0 435 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 L1TD1Q5T7N2 865 aaKnown RBP10.27□□□□□ -0.77
C9orf85-202ENST00000377027 SDHAF4Q5VUM1 108 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 DGLUCYQ7Z3D6 616 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 BRSK2Q8IWQ3 736 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 ATRIPQ8WXE1 791 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 HVCN1Q96D96 273 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 USP28Q96RU2 1077 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 CBWD1Q9BRT8 395 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 GPR88Q9GZN0 384 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 POLR3BQ9NW08 1133 aaPredicted RBP10.27□□□□□ -0.77
C9orf85-202ENST00000377027 NCDNQ9UBB6 729 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 STK17AQ9UEE5 414 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 ASB3Q9Y575 518 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.27□□□□□ -0.77
C9orf85-202ENST00000377027 SRPRBQ9Y5M8 271 aaKnown RBP10.27□□□□□ -0.77
C9orf85-202ENST00000377027 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.77
C9orf85-202ENST00000377027 SPEGQ15772 3267 aa10.27□□□□□ -0.77
C9orf85-202ENST00000377027 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 KPNA7A9QM74 516 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 CHURC1-FNTBB4DL54 471 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 PAPSS2O95340 614 aaPredicted RBP10.26□□□□□ -0.77
C9orf85-202ENST00000377027 ITGB3P05106 788 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 SYT1P21579 422 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 ACAT1P24752 427 aaKnown RBP10.26□□□□□ -0.77
C9orf85-202ENST00000377027 POLR2BP30876 1174 aaKnown RBP10.26□□□□□ -0.77
C9orf85-202ENST00000377027 FNTBP49356 437 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 NLRP12P59046 1061 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 CEBPZQ03701 1054 aaKnown RBP10.26□□□□□ -0.77
C9orf85-202ENST00000377027 PUM1Q14671 1186 aaKnown RBP eCLIP10.26□□□□□ -0.77
C9orf85-202ENST00000377027 PON2Q15165 354 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 LMBRD2Q68DH5 695 aaPredicted RBP10.26□□□□□ -0.77
C9orf85-202ENST00000377027 TRIM68Q6AZZ1 485 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 ARMCX5Q6P1M9 558 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 NLRP8Q86W28 1048 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 PDCL2Q8N4E4 241 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 POMGNT1Q8WZA1 660 aa10.26□□□□□ -0.77
C9orf85-202ENST00000377027 EZH1Q92800 747 aaPredicted RBP10.26□□□□□ -0.77
C9orf85-202ENST00000377027 USP13Q92995 863 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms