RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 GOLGA8MH3BSY2 632 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 IRF6O14896 467 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 RXRBP28702 533 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 NEK3P51956 506 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 PSMC1P62191 440 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 KCNJ11Q14654 390 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 KCNT1Q5JUK3 1230 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 ZBTB8OSQ8IWT0 167 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 RNF149Q8NC42 400 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 CFAP61Q8NHU2 1237 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 ANKRD36BP1Q96IX9 119 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 ZNF570Q96NI8 536 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 C10orf88Q9H8K7 445 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 BTBD7Q9P203 1132 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 HAO1Q9UJM8 370 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 TEX264Q9Y6I9 313 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 E7ENQ6 273 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 HNRNPCL1O60812 293 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 IL18RAPO95256 599 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 TGDSO95455 350 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 TNNC2P02585 160 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 ADRA1DP25100 572 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 TARSP26639 723 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 MIPP30301 263 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 STIP1P31948 543 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 TFAMQ00059 246 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 DALRD3Q5D0E6 543 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 CAPN12Q6ZSI9 719 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 CCDC125Q86Z20 511 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 ENDOVQ8N8Q3 282 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 RNF217Q8TC41 542 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 TCP10LQ8TDR4 215 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 RSAD2Q8WXG1 361 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 MIEF2Q96C03 454 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 RTP4Q96DX8 246 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 RSRC1Q96IZ7 334 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 GPR20Q99678 358 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 TCHPQ9BT92 498 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 NFKBIZQ9BYH8 718 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 RSAD1Q9HA92 442 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 METTL5Q9NRN9 209 aaKnown RBP11.17□□□□□ -0.62
ABCF1-202ENST00000376545 CNTN3Q9P232 1028 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 SUFUQ9UMX1 484 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 OTOFQ9HC10 1997 aa11.17□□□□□ -0.62
ABCF1-202ENST00000376545 SOCS7O14512 581 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 DNAJC6O75061 913 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 PEX11AO75192 247 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 CILPO75339 1184 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 GPD2P43304 727 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 DYNLT1P63172 113 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 NOMO1Q15155 1222 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 SCARA5Q6ZMJ2 495 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 VSIG1Q86XK7 387 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 IGDCC3Q8IVU1 814 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■□□□ 12.8
ABCF1-202ENST00000376545 SLC44A1Q8WWI5 657 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 TBC1D10AQ9BXI6 508 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 BATF3Q9NR55 127 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 XPO7Q9UIA9 1087 aaKnown RBP11.16□□□□□ -0.62
ABCF1-202ENST00000376545 TNFSF13BQ9Y275 285 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 PPP2R3BQ9Y5P8 575 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 SRGAP2CP0DJJ0 459 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 ATP2A2P16615 1042 aaKnown RBP11.16□□□□□ -0.62
ABCF1-202ENST00000376545 RASSF2P50749 326 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 EIF3EP60228 445 aaKnown RBP11.16□□□□□ -0.62
ABCF1-202ENST00000376545 RNASELQ05823 741 aaKnown RBP11.16□□□□□ -0.62
ABCF1-202ENST00000376545 TAF5Q15542 800 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 WASHC2DQ5SRD0 308 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 ATF7IP2Q5U623 682 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 NLRP9Q7RTR0 991 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 PDIK1LQ8N165 341 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 C1orf127Q8N9H9 656 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 FAM13CQ8NE31 585 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 TWNKQ96RR1 684 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 PEBP4Q96S96 227 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 ELOVL4Q9GZR5 314 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 FAM124BQ9H5Z6 455 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-202ENST00000376545 KCNK13Q9HB14 408 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 USP18Q9UMW8 372 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.16□□□□□ -0.62
ABCF1-202ENST00000376545 PLXNA1Q9UIW2 1896 aa11.16□□□□□ -0.62
ABCF1-202ENST00000376545 SPAG6O75602 509 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 MICAL2O94851 1124 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 GM2AP17900 193 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 PTPN4P29074 926 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 MAGEA6P43360 314 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 RAP1GAPP47736 663 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 ZNF143P52747 638 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 MBTD1Q05BQ5 628 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 PRKD1Q15139 912 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 CMPK2Q5EBM0 449 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 PRAMEF18Q5VWM3 479 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 CLNKQ7Z7G1 428 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 EMC1Q8N766 993 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 KCTD6Q8NC69 237 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 USP6NLQ92738 828 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 CYTH2Q99418 400 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 CDT1Q9H211 546 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 RNPEPL1Q9HAU8 725 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms