RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 ARHGAP20Q9P2F6 1191 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 RNF103-CHMP3A0A140T963 221 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 ANGPT2O15123 496 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 TLR2O60603 784 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 LSM8O95777 96 aaKnown RBP11.41□□□□□ -0.58
MDC1-201ENST00000376406 CASP4P49662 377 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 PDAP1Q13442 181 aaKnown RBP11.41□□□□□ -0.58
MDC1-201ENST00000376406 DACT2Q5SW24 774 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 UGT3A1Q6NUS8 523 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 C4orf19Q8IY42 314 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 AGR3Q8TD06 166 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 DACT3Q96B18 629 aaPredicted RBP11.41□□□□□ -0.58
MDC1-201ENST00000376406 AGAP3Q96P47 875 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 FAM167BQ9BTA0 163 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 KCNQ5Q9NR82 932 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 TRIM17Q9Y577 477 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 PRMT2P55345 433 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 SP3Q02447 781 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 ZNF507Q8TCN5 953 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 CA12O43570 354 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 KRT16P08779 473 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 ARP10275 920 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 NPTX2P47972 431 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 SMAD1Q15797 465 aaKnown RBP11.41□□□□□ -0.58
MDC1-201ENST00000376406 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
MDC1-201ENST00000376406 STAMBPL1Q96FJ0 436 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
MDC1-201ENST00000376406 ASPSCR1Q9BZE9 553 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 TASP1Q9H6P5 420 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 ATRNO75882 1429 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 GRAP2O75791 330 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 ESRRBO95718 433 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 PDK2Q15119 407 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 ASCC2Q9H1I8 757 aaPredicted RBP11.41□□□□□ -0.58
MDC1-201ENST00000376406 ITGA11Q9UKX5 1188 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 L1RE1Q9UN81 338 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 CDY2AQ9Y6F7 541 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 CDY1Q9Y6F8 540 aa11.41□□□□□ -0.58
MDC1-201ENST00000376406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.41□□□□□ -0.58
MDC1-201ENST00000376406 USP10Q14694 798 aaKnown RBP11.4□□□□□ -0.58
MDC1-201ENST00000376406 CNGA3Q16281 694 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 CLEC16AQ2KHT3 1053 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 CAPRIN2Q6IMN6 1127 aaKnown RBP11.4□□□□□ -0.58
MDC1-201ENST00000376406 LRRC71Q8N4P6 559 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 CDCA5Q96FF9 252 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 NSL1Q96IY1 281 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 BATF3Q9NR55 127 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 RARGP13631 454 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 OCA2Q04671 838 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 EPC2Q52LR7 807 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 IL31Q6EBC2 164 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 TIGD7Q6NT04 549 aaPredicted RBP11.4□□□□□ -0.58
MDC1-201ENST00000376406 LZICQ8WZA0 190 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 OTUB1Q96FW1 271 aaPredicted RBP11.4□□□□□ -0.58
MDC1-201ENST00000376406 KCNK16Q96T55 309 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 SEZ6LQ9BYH1 1024 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 FHDC1Q9C0D6 1143 aaPredicted RBP11.4□□□□□ -0.58
MDC1-201ENST00000376406 NDFIP2Q9NV92 336 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 KIF1CO43896 1103 aaKnown RBP11.4□□□□□ -0.58
MDC1-201ENST00000376406 ADORA2AP29274 412 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 ARMC6Q6NXE6 501 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 RIOX2Q8IUF8 465 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 YIPF3Q9GZM5 350 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 SLC40A1Q9NP59 571 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 BCAT1P54687 386 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 SYTL3Q4VX76 610 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 BOLA3Q53S33 107 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 PRPF39Q86UA1 669 aaKnown RBP11.4□□□□□ -0.58
MDC1-201ENST00000376406 SLC47A2Q86VL8 602 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 WDR49Q8IV35 697 aa11.4□□□□□ -0.58
MDC1-201ENST00000376406 EPS8L3Q8TE67 593 aaKnown RBP11.4□□□□□ -0.58
MDC1-201ENST00000376406 SLC15A5A6NIM6 579 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 RTN3O95197 1032 aaPredicted RBP11.4□□□□□ -0.59
MDC1-201ENST00000376406 GFAPP14136 432 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 DCAF6Q58WW2 860 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 BTNL9Q6UXG8 535 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 EXD1Q8NHP7 514 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 E2F7Q96AV8 911 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 PPP1R36Q96LQ0 422 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 FAM49BQ9NUQ9 324 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 ATP11BQ9Y2G3 1177 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 HMGB3O15347 200 aaKnown RBP11.4□□□□□ -0.59
MDC1-201ENST00000376406 AKAP3O75969 853 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 HIST1H2AGP0C0S8 130 aaPredicted RBP11.4□□□□□ -0.59
MDC1-201ENST00000376406 HIST1H2ADP20671 130 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 SEC24CP53992 1094 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 FSCN1Q16658 493 aaKnown RBP11.4□□□□□ -0.59
MDC1-201ENST00000376406 ZBTB41Q5SVQ8 909 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 PRUNE1Q86TP1 453 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 CBWD2Q8IUF1 395 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 HIST1H2AHQ96KK5 128 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 HIST1H2AJQ99878 128 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 H2AFJQ9BTM1 129 aa11.4□□□□□ -0.59
MDC1-201ENST00000376406 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 RBP3P10745 1247 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 TMEM62Q0P6H9 643 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 ZNF177Q13360 481 aaPredicted RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 CDH18Q13634 790 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms