RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SIP14410 1827 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 CLGNO14967 610 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 MCF2LO15068 1137 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 B4GALT4O60513 344 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 ERBB2P04626 1255 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 RAD23BP54727 409 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 RNASELQ05823 741 aaKnown RBP15.23■□□□□ 0.03
MSH5-201ENST00000375703 OVGP1Q12889 678 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 LY6KQ17RY6 165 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 PLEKHG4Q58EX7 1191 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 ZNF667Q5HYK9 610 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 FAM13CQ8NE31 585 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 SPATA18Q8TC71 538 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 ZNF398Q8TD17 642 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 KLRG1Q96E93 195 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 ZNF668Q96K58 619 aaPredicted RBP15.23■□□□□ 0.03
MSH5-201ENST00000375703 ZNF570Q96NI8 536 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 CYTH2Q99418 400 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 CHMP2BQ9UQN3 213 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 TRUB2O95900 331 aaKnown RBP15.22■□□□□ 0.03
MSH5-201ENST00000375703 TSHRP16473 764 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 SPDYAQ5MJ70 313 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 ANKRD20A2Q5SQ80 823 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 ANKRD20A1Q5TYW2 823 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 ATF7IP2Q5U623 682 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 ANGEL2Q5VTE6 544 aaKnown RBP15.22■□□□□ 0.03
MSH5-201ENST00000375703 ANKRD20A3Q5VUR7 823 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 CEP120Q8N960 986 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 FAM167AQ96KS9 214 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 C2orf40Q9H1Z8 148 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 ALG13Q9NP73 1137 aaKnown RBP15.22■□□□□ 0.03
MSH5-201ENST00000375703 SLC5A4Q9NY91 659 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 NKX1-2Q9UD57 310 aaPredicted RBP15.22■□□□□ 0.03
MSH5-201ENST00000375703 USP18Q9UMW8 372 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 IKBKGQ9Y6K9 419 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 DOCK1Q14185 1865 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 RXRBP28702 533 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 EPHB2P29323 1055 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 ELK3P41970 407 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 CCNG1P51959 295 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 NRLP54845 237 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 DALRD3Q5D0E6 543 aaKnown RBP15.22■□□□□ 0.03
MSH5-201ENST00000375703 DARS2Q6PI48 645 aaKnown RBP15.22■□□□□ 0.03
MSH5-201ENST00000375703 IGDCC3Q8IVU1 814 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 RFWD2Q8NHY2 731 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 BATF3Q9NR55 127 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 SUFUQ9UMX1 484 aa15.22■□□□□ 0.03
MSH5-201ENST00000375703 IQANK1A0A1B0GTG1 560 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 SOWAHBA6NEL2 793 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 INO80B-WBP1J3KQ70 363 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 LPXNO60711 386 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 TGFB3P10600 412 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 PTPN4P29074 926 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 STIP1P31948 543 aaKnown RBP15.21■□□□□ 0.03
MSH5-201ENST00000375703 ACAP1Q15027 740 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 METTL7BQ6UX53 244 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 KCNV2Q8TDN2 545 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 INO80BQ9C086 356 aaPredicted RBP15.21■□□□□ 0.03
MSH5-201ENST00000375703 RSAD1Q9HA92 442 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 RNPEPL1Q9HAU8 725 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 PTPRHQ9HD43 1115 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 SAR1AQ9NR31 198 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 ASNSD1Q9NWL6 643 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 PPME1Q9Y570 386 aa15.21■□□□□ 0.03
MSH5-201ENST00000375703 ACKR2O00590 384 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 TRAFD1O14545 582 aaPredicted RBP15.21■□□□□ 0.02
MSH5-201ENST00000375703 CALB2P22676 271 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 PROZP22891 400 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 NPNTQ6UXI9 565 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 CLNKQ7Z7G1 428 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 ZC3H18Q86VM9 953 aaKnown RBP15.21■□□□□ 0.02
MSH5-201ENST00000375703 SLC4A11Q8NBS3 891 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 TRIM55Q9BYV6 548 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 BCO2Q9BYV7 579 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 SDCBP2Q9H190 292 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 RPF1Q9H9Y2 349 aaKnown RBP15.21■□□□□ 0.02
MSH5-201ENST00000375703 DONSONQ9NYP3 566 aa15.21■□□□□ 0.02
MSH5-201ENST00000375703 A0A0G2JND7 137 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 B4GALT5O43286 388 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 GAS2O43903 313 aaKnown RBP15.2■□□□□ 0.02
MSH5-201ENST00000375703 NEFHP12036 1026 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
MSH5-201ENST00000375703 MMRN1Q13201 1228 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 PTK7Q13308 1070 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 PRKG1Q13976 671 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 SYCP2LQ5T4T6 812 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 EEF1DP3Q658K8 133 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 SMYD5Q6GMV2 418 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 LRRC6Q86X45 466 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 NLRP4Q96MN2 994 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 ADPGKQ9BRR6 497 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 TSSK1BQ9BXA7 367 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 SIX4Q9UIU6 781 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 NFKBIEO00221 500 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 PEX11AO75192 247 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 MICAL2O94851 1124 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 GJB1P08034 283 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 CXCL8P10145 99 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 EDNRBP24530 442 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms