RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PON1P27169 355 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 MRNIPQ6NTE8 343 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ZBTB49Q6ZSB9 765 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 MTDHQ86UE4 582 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ENKURQ8TC29 256 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 PRPF19Q9UMS4 504 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 FIS1Q9Y3D6 152 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 FLT1P17948 1338 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 TMEM114B3SHH9 223 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 TLR2O60603 784 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 NPTXRO95502 500 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ME2P23368 584 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 PTGER2P43116 358 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 PPIL2Q13356 520 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 OASLQ15646 514 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 PDK4Q16654 411 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ANKS3Q6ZW76 656 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ARL8AQ96BM9 186 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF333Q96JL9 665 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ECSITQ9BQ95 431 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 FETUBQ9UGM5 382 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CCDC195A0A1B0GUA6 201 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 C2CD2LO14523 706 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 FOXO4P98177 505 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 DHX33Q9H6R0 707 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 JAG2Q9Y219 1238 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CAPN6Q9Y6Q1 641 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 UBAP1LF5GYI3 381 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 TGDSO95455 350 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CTDNEP1O95476 244 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 IL12RB1P42701 662 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 OLR1P78380 273 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF394Q53GI3 561 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 TMEM120AQ9BXJ8 343 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 SYTL2Q9HCH5 934 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ARHGEF28Q8N1W1 1705 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 RPS6KA3P51812 740 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CEP78Q5JTW2 689 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF786Q8N393 782 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 FAM162AQ96A26 154 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 QKIQ96PU8 341 aaKnown RBP eCLIP10.55□□□□□ -0.722e-7■■■■■ 29
PTCH1-204ENST00000375290 TMEM109Q9BVC6 243 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 COMMD8Q9NX08 183 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CYP26A1O43174 497 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CACNB1Q02641 598 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 BNIP2Q12982 314 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 TTLL4Q14679 1199 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 TTLL9Q3SXZ7 439 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 AMER2Q8N7J2 671 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 OR6B3Q8NGW1 331 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 TFB1MQ8WVM0 346 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 SP110Q9HB58 689 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 GMEB1Q9Y692 573 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 USP10Q14694 798 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 GRTP1Q5TC63 336 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 TTC23Q5W5X9 447 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 ATG9AQ7Z3C6 839 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 BTBD9Q96Q07 612 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 RHBDL2Q9NX52 303 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 STK32BQ9NY57 414 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 MCM8Q9UJA3 840 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 PCDHA3Q9Y5H8 950 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 HACD1B0YJ81 288 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 C5orf58C9J3I9 102 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 AIM2O14862 343 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CRABP2P29373 138 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 PIK3CGP48736 1102 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 HERVK_113P62684 666 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 DYNLL1P63167 89 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CDO1Q16878 200 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 FAM98BQ52LJ0 330 aaKnown RBP10.55□□□□□ -0.72
PTCH1-204ENST00000375290 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 FBXO25Q8TCJ0 367 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 RORBQ92753 470 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 RAB26Q9ULW5 256 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 SH3GLB1Q9Y371 365 aa10.55□□□□□ -0.72
PTCH1-204ENST00000375290 CEP170BQ9Y4F5 1589 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 PPARDQ03181 441 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 Q4G0T1 1027 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 KCNT1Q5JUK3 1230 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 EXOC3L1Q86VI1 746 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 ATPAF2Q8N5M1 289 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 NPHP4O75161 1426 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 TRIM49D1C9J1S8 452 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 PDGFRBP09619 1106 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 RARBP10826 455 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF746Q6NUN9 644 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 ZCCHC7Q8N3Z6 543 aaKnown RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 C7orf31Q8N865 590 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 SRPK1Q96SB4 655 aaKnown RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 SLAIN2Q9P270 581 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 CRNNQ9UBG3 495 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 PROSCO94903 275 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 GPD1P21695 349 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 RECQLP46063 649 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-204ENST00000375290 AQP5P55064 265 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 TROAPQ12815 778 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 DPYSQ14117 519 aa10.54□□□□□ -0.72
PTCH1-204ENST00000375290 SCARA3Q6AZY7 606 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms