RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 A1BGP04217 495 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 EIF4A1P60842 406 aaKnown RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 NOMO3P69849 1222 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 CXADRP78310 365 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 KIF23Q02241 960 aaPredicted RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 NOMO2Q5JPE7 1267 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 PNMA8AQ86V59 439 aaPredicted RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 FAM43AQ8N2R8 423 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 NLGN4YQ8NFZ3 816 aaPredicted RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 NUP133Q8WUM0 1156 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 TSR2Q969E8 191 aaKnown RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 MARS2Q96GW9 593 aaKnown RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 SRP68Q9UHB9 627 aaKnown RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 IPPQ9Y573 584 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 USP16Q9Y5T5 823 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 SLX4Q8IY92 1834 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 MYH13Q9UKX3 1938 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 FER1L6Q2WGJ9 1857 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 CCDC154A6NI56 674 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 CHL1O00533 1208 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 MGST3O14880 152 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 ERN1O75460 977 aaKnown RBP5.51□□□□□ -1.53
PMS1-202ENST00000374826 HAUS5O94927 633 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 STARD3NLO95772 234 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 ANXA1P04083 346 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 GNAI1P63096 354 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 CALD1Q05682 793 aaKnown RBP5.51□□□□□ -1.53
PMS1-202ENST00000374826 IL10RAQ13651 578 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 PTPN21Q16825 1174 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 C3orf36Q3SXR2 165 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 TBC1D15Q8TC07 691 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 IFI44Q8TCB0 444 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 COA7Q96BR5 231 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 PDLIM2Q96JY6 352 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 PNKPQ96T60 521 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 GALNT9Q9HCQ5 603 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 TBCCD1Q9NVR7 557 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 LIMCH1Q9UPQ0 1083 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 MTO1Q9Y2Z2 717 aaKnown RBP5.51□□□□□ -1.53
PMS1-202ENST00000374826 COL4A3BPQ9Y5P4 624 aa5.51□□□□□ -1.53
PMS1-202ENST00000374826 USP42Q9H9J4 1324 aaKnown RBP5.5□□□□□ -1.53
PMS1-202ENST00000374826 FANCIQ9NVI1 1328 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 DNAJC9-AS1A6NH13 148 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 GRM6O15303 877 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 PROP1O75360 226 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 ZNF853P0CG23 659 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 MTHFD1P11586 935 aaKnown RBP5.5□□□□□ -1.53
PMS1-202ENST00000374826 MYL6BP14649 208 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 EIF2S2P20042 333 aaKnown RBP5.5□□□□□ -1.53
PMS1-202ENST00000374826 EDNRBP24530 442 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 HMGB2P26583 209 aaKnown RBP5.5□□□□□ -1.53
PMS1-202ENST00000374826 SLC6A4P31645 630 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 RFC4P35249 363 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 ABCG1P45844 678 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 SLFN5Q08AF3 891 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 CYP2A13Q16696 494 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 PABPC1LQ4VXU2 614 aaKnown RBP5.5□□□□□ -1.53
PMS1-202ENST00000374826 PPP4R3AQ6IN85 833 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 NGEFQ8N5V2 710 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 SCARB1Q8WTV0 552 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 NACC2Q96BF6 587 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 TEX13AQ9BXU3 409 aaPredicted RBP5.5□□□□□ -1.53
PMS1-202ENST00000374826 PCDH12Q9NPG4 1184 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 CASS4Q9NQ75 786 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 BABAM1Q9NWV8 329 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 LRIT1Q9P2V4 623 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 HSFX1Q9UBD0 423 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.5□□□□□ -1.53
PMS1-202ENST00000374826 TIAM2Q8IVF5 1701 aa5.5□□□□□ -1.53
PMS1-202ENST00000374826 TNKSO95271 1327 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 ZNF521Q96K83 1311 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 SBK3P0C264 359 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 FCER1AP12319 257 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 GYS1P13807 737 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 IL6STP40189 918 aaPredicted RBP5.49□□□□□ -1.53
PMS1-202ENST00000374826 EIF5P55010 431 aaKnown RBP5.49□□□□□ -1.53
PMS1-202ENST00000374826 MRPS35P82673 323 aaKnown RBP5.49□□□□□ -1.53
PMS1-202ENST00000374826 RAB39AQ14964 217 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 PROSER3Q2NL68 480 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 UAP1L1Q3KQV9 507 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 TSPYL6Q8N831 410 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 C8orf58Q8NAV2 365 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 SMG7Q92540 1137 aaKnown RBP5.49□□□□□ -1.53
PMS1-202ENST00000374826 KAT5Q92993 513 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 MRGPRX4Q96LA9 322 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 MED15Q96RN5 788 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 SMAD5Q99717 465 aaKnown RBP5.49□□□□□ -1.53
PMS1-202ENST00000374826 SLC13A1Q9BZW2 595 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 CHPF2Q9P2E5 772 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 SLC17A6Q9P2U8 582 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 RNF7Q9UBF6 113 aa5.49□□□□□ -1.53
PMS1-202ENST00000374826 IL16Q14005 1332 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 GOLGB1Q14789 3259 aaKnown RBP5.48□□□□□ -1.53
PMS1-202ENST00000374826 PROB1E7EW31 1015 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 TCERG1O14776 1098 aaKnown RBP5.48□□□□□ -1.53
PMS1-202ENST00000374826 AGFG2O95081 481 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 ZFPL1O95159 310 aa5.48□□□□□ -1.53
PMS1-202ENST00000374826 RPLP2P05387 115 aaKnown RBP5.48□□□□□ -1.53
PMS1-202ENST00000374826 MMP10P09238 476 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms