RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 COMMD8Q9NX08 183 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 IL37Q9NZH6 218 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 EHD2Q9NZN4 543 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.03□□□□□ -0.48
HSPG2-202ENST00000374676 FAM50BQ9Y247 325 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 USP15Q9Y4E8 981 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-202ENST00000374676 BDP1A6H8Y1 2624 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 PATJQ8NI35 1801 aa12.02□□□□□ -0.48
HSPG2-202ENST00000374676 DENND4AQ7Z401 1863 aa12.02□□□□□ -0.48
HSPG2-202ENST00000374676 A0A1W2PQJ5 194 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 SLC38A8A6NNN8 435 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 ZNF197O14709 1029 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 TNFRSF10BO14763 440 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 BEST1O76090 585 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 MICAL2O94851 1124 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 FGF19O95750 216 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 PNMA6AP0CW24 399 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-202ENST00000374676 BRD2P25440 801 aaKnown RBP12.02□□□□□ -0.49
HSPG2-202ENST00000374676 BCAT1P54687 386 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 MAP3K7CLP57077 242 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 SLC8A3P57103 927 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 MRPS5P82675 430 aaKnown RBP12.02□□□□□ -0.49
HSPG2-202ENST00000374676 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 CBX2Q14781 532 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-202ENST00000374676 TAF12Q16514 161 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 GOLGA7BQ2TAP0 167 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 CYP4A22Q5TCH4 519 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 SDHAF4Q5VUM1 108 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-202ENST00000374676 DENND5BQ6ZUT9 1274 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 GRASPQ7Z6J2 395 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-202ENST00000374676 SLC47A2Q86VL8 602 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 TTC30AQ86WT1 665 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 VSTM4Q8IW00 320 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 NUP93Q8N1F7 819 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 CORO1BQ9BR76 489 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 TTLL2Q9BWV7 592 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 ACP6Q9NPH0 428 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 ASAH2Q9NR71 780 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 HCFC1R1Q9NWW0 138 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 PCDHGC3Q9UN70 934 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.02□□□□□ -0.49
HSPG2-202ENST00000374676 TTC28Q96AY4 2481 aa12.02□□□□□ -0.49
HSPG2-202ENST00000374676 ANAPC1Q9H1A4 1944 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 MYO10Q9HD67 2058 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 FAM92AA1XBS5 289 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 HHLA1C9JL84 531 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 XPO1O14980 1071 aaKnown RBP12.01□□□□□ -0.49
HSPG2-202ENST00000374676 THAP12O43422 761 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 GFPT2O94808 682 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 RTN3O95197 1032 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-202ENST00000374676 CALCAP01258 141 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 RHOP08100 348 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 CCDC172P0C7W6 258 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 SETSIPP0DME0 302 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 CYP11B1P15538 503 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 FERP16591 822 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 GPD2P43304 727 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 NTHL1P78549 312 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 PDE4CQ08493 712 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 BST2Q10589 180 aaKnown RBP12.01□□□□□ -0.49
HSPG2-202ENST00000374676 PABPC1LQ4VXU2 614 aaKnown RBP12.01□□□□□ -0.49
HSPG2-202ENST00000374676 SPECC1LQ69YQ0 1117 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 ZNF677Q86XU0 584 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 TMC8Q8IU68 726 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 GPR152Q8TDT2 470 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 SLC35F5Q8WV83 523 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 MRFAP1L1Q96HT8 127 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
HSPG2-202ENST00000374676 LHX5Q9H2C1 402 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 IL21Q9HBE4 155 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 AIPL1Q9NZN9 384 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 UXTQ9UBK9 157 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-202ENST00000374676 CDH22Q9UJ99 828 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 CAPN11Q9UMQ6 739 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 CLUHO75153 1309 aa12.01□□□□□ -0.49
HSPG2-202ENST00000374676 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
HSPG2-202ENST00000374676 OBSL1O75147 1896 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 SOBPA7XYQ1 873 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 F11P03951 625 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 FSHRP23945 695 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 YWHAQP27348 245 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 KRT9P35527 623 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 PLA2G4AP47712 749 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 RPL34P49207 117 aaKnown RBP12□□□□□ -0.49
HSPG2-202ENST00000374676 PDE6CP51160 858 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 ZNF75DP51815 510 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 KIF11P52732 1056 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 ZBED6P86452 979 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 MTMR3Q13615 1198 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 TRIM14Q14142 442 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 RAB41Q5JT25 222 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 PRSS36Q5K4E3 855 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 PDZD4Q76G19 769 aaPredicted RBP12□□□□□ -0.49
HSPG2-202ENST00000374676 IRF2BP2Q7Z5L9 587 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 NOP9Q86U38 636 aaKnown RBP12□□□□□ -0.49
HSPG2-202ENST00000374676 PIGZQ86VD9 579 aa12□□□□□ -0.49
HSPG2-202ENST00000374676 ZNF397Q8NF99 534 aaPredicted RBP12□□□□□ -0.49
HSPG2-202ENST00000374676 UBA3Q8TBC4 463 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms