RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 PTK7Q13308 1070 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 TFDP2Q14188 446 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 DPYSL3Q14195 570 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 EFTUD2Q15029 972 aaKnown RBP eCLIP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 MSS51Q4VC12 460 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 LGSNQ5TDP6 509 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 MPZL3Q6UWV2 235 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 CHSY1Q86X52 802 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 CMASQ8NFW8 434 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 CFAP61Q8NHU2 1237 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 NAF1Q96HR8 494 aaKnown RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 TRIM6Q9C030 488 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 DCTN4Q9UJW0 460 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 USP18Q9UMW8 372 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 A0A0G2JND7 137 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 GOLGA8RI6L899 631 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 HAUS5O94927 633 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 IL18RAPO95256 599 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 EGFRP00533 1210 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 HOXC6P09630 235 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 P4HA1P13674 534 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 IL1R2P27930 398 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 EPHB2P29323 1055 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 TCF7P36402 384 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 CCDC62Q6P9F0 684 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 DARS2Q6PI48 645 aaKnown RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 MAP7D3Q8IWC1 876 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 MICALL2Q8IY33 904 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 ENDOVQ8N8Q3 282 aaKnown RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 JOSD2Q8TAC2 188 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 MZB1Q8WU39 189 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 HSPH1Q92598 858 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 APOPT1Q96IL0 206 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 MPHOSPH6Q99547 160 aaKnown RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 XYLT2Q9H1B5 865 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 DCLRE1BQ9H816 532 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 PCSK1NQ9UHG2 260 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 TNS1Q9HBL0 1735 aaKnown RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 LCTP09848 1927 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-204ENST00000374346 PCK1P35558 622 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 RAD23BP54727 409 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 TSNAXIP1Q2TAA8 658 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 METTL7BQ6UX53 244 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 TSHZ1Q6ZSZ6 1077 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 XYLT1Q86Y38 959 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 UNC45BQ8IWX7 931 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 TRIM42Q8IWZ5 723 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 DHX37Q8IY37 1157 aaKnown RBP11.92□□□□□ -0.5
PTPN20-204ENST00000374346 APBB2Q92870 758 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 ADPGKQ9BRR6 497 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 TLE6Q9H808 572 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 RPF1Q9H9Y2 349 aaKnown RBP11.92□□□□□ -0.5
PTPN20-204ENST00000374346 PIM2Q9P1W9 311 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 CHMP2BQ9UQN3 213 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 CHADO15335 359 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 PEX11AO75192 247 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 TMEM63AO94886 807 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 DESP17661 470 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 GNAZP19086 355 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 MIPP30301 263 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 ELK3P41970 407 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 YWHAGP61981 247 aaKnown RBP eCLIP11.92□□□□□ -0.5
PTPN20-204ENST00000374346 GAD2Q05329 585 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 ATF7IP2Q5U623 682 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 SAMD7Q7Z3H4 446 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 LMNTD2Q8IXW0 634 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 ARFGAP1Q8N6T3 406 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 SLC44A1Q8WWI5 657 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 MCUR1Q96AQ8 359 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 CPXM1Q96SM3 734 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 PCYT2Q99447 389 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 BTBD10Q9BSF8 475 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 LOC285556D6RIA3 1793 aa11.92□□□□□ -0.5
PTPN20-204ENST00000374346 TCRBV9S1A1TA0A576 114 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 ACKR2O00590 384 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 DNAJC6O75061 913 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 KRT37O76014 449 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 TRUB2O95900 331 aaKnown RBP11.91□□□□□ -0.5
PTPN20-204ENST00000374346 TPBGLP0DKB5 382 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 CNTN2Q02246 1040 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 ZRSR2Q15696 482 aaKnown RBP11.91□□□□□ -0.5
PTPN20-204ENST00000374346 TTC39BQ5VTQ0 682 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-204ENST00000374346 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.91□□□□□ -0.5
PTPN20-204ENST00000374346 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 TAB3Q8N5C8 712 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-204ENST00000374346 EMC1Q8N766 993 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 FAF2Q96CS3 445 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 BCO2Q9BYV7 579 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 C10orf88Q9H8K7 445 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.91□□□□□ -0.5
PTPN20-204ENST00000374346 PAK5Q9P286 719 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 SLC17A7Q9P2U7 560 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 STOML1Q9UBI4 398 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
PTPN20-204ENST00000374346 LRRC42Q9Y546 428 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms