RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CYP2J2P51589 502 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 TFDP1Q14186 410 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 TGFBIQ15582 683 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 ANKMY2Q8IV38 441 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
PRPF4-201ENST00000374198 CEP95Q96GE4 821 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
PRPF4-201ENST00000374198 CNBD2Q96M20 576 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 OSBPL6Q9BZF3 934 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 SELENONQ9NZV5 590 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 ANAPC7Q9UJX3 599 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 NFASCO94856 1347 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 MYOCOSA0A1B0GUC4 107 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 C6orf222P0C671 652 aaPredicted RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 ZSCAN5DPP0CG00 497 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 GSTT2P0CG29 244 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 GSTT2BP0CG30 244 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 EPHB1P54762 984 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 HDAC4P56524 1084 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 FMO1Q01740 532 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 CREB5Q02930 508 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 MORF4L2Q15014 288 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 ACAP1Q15027 740 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 CNGA3Q16281 694 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 RALGPS1Q5JS13 557 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 PGM2L1Q6PCE3 622 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 TMEM110Q86TL2 294 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 POU5F2Q8N7G0 328 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 HIPK4Q8NE63 616 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 OLFML3Q9NRN5 406 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 TUBA8Q9NY65 449 aaPredicted RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 FAM32AQ9Y421 112 aaKnown RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 CLUHO75153 1309 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 DENND3A2RUS2 1198 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 USP17L5A8MUK1 530 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 EIF3DO15371 548 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 ADCY6O43306 1168 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 ADAM23O75077 832 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 SORBS2O94875 1100 aaKnown RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 MT-ND3P03897 115 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 PHBP35232 272 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 CDK9P50750 372 aaKnown RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 UBAP2LQ14157 1087 aaKnown RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 GK3PQ14409 553 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 ARID3BQ8IVW6 561 aaPredicted RBP13.47□□□□□ -0.25
PRPF4-201ENST00000374198 DCAKDQ8WVC6 231 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 C7orf26Q96N11 449 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 TCHPQ9BT92 498 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 PADI4Q9UM07 663 aa13.47□□□□□ -0.25
PRPF4-201ENST00000374198 FUOMA2VDF0 154 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 SFI1A8K8P3 1242 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 BANF1O75531 89 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 SERPINA6P08185 405 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 FAM58BPP0C7Q3 252 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 POLR2MP0CAP2 368 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 RBP3P10745 1247 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 AOC1P19801 751 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 PRDX5P30044 214 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 SSTR1P30872 391 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 RXRGP48443 463 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 ARSEP51690 589 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 AQP5P55064 265 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 BFSP1Q12934 665 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 GPS1Q13098 491 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 PDAP1Q13442 181 aaKnown RBP13.46□□□□□ -0.25
PRPF4-201ENST00000374198 ELMSAN1Q6PJG2 1045 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 SLC47A2Q86VL8 602 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 PYROXD1Q8WU10 500 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 USP6NLQ92738 828 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
PRPF4-201ENST00000374198 APOPT1Q96IL0 206 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 PPP1R10Q96QC0 940 aaKnown RBP13.46□□□□□ -0.25
PRPF4-201ENST00000374198 LIN28AQ9H9Z2 209 aaKnown RBP13.46□□□□□ -0.25
PRPF4-201ENST00000374198 DMAC2Q9NW81 257 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 DOLKQ9UPQ8 538 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 COQ6Q9Y2Z9 468 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 PPME1Q9Y570 386 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 AP4B1Q9Y6B7 739 aa13.46□□□□□ -0.25
PRPF4-201ENST00000374198 I3L4J1 428 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 ATP5BP06576 529 aaKnown RBP13.46□□□□□ -0.26
PRPF4-201ENST00000374198 SPATA31C1P0DKV0 1188 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.26
PRPF4-201ENST00000374198 PHKA2P46019 1235 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 ITGA7Q13683 1181 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 KLHL38Q2WGJ6 581 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 KCTD21Q4G0X4 260 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 NANOGNBQ7Z5D8 188 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 KBTBD6Q86V97 674 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 PPP4R1Q8TF05 950 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 KAT5Q92993 513 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.26
PRPF4-201ENST00000374198 ACSS3Q9H6R3 686 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 POMPQ9Y244 141 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms