RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 IFFO1Q0D2I5 559 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 SNCBQ16143 134 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 CCDC13Q8IYE1 715 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 COLGALT2Q8IYK4 626 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 OR5B17Q8NGF7 314 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 ZNF473Q8WTR7 871 aaKnown RBP15.06■□□□□ 0
HMGA1-203ENST00000374116 ZIM3Q96PE6 472 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 FNBP1Q96RU3 617 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 SLC40A1Q9NP59 571 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 ACP6Q9NPH0 428 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 GOLGA6L7A0A1B0GV03 622 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 EPOPA6NHQ4 379 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 PPEF2O14830 753 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 HLA-DRAP01903 254 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 ITGB1P05556 798 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 KCNE1P15382 129 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 TNNI1P19237 187 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 BCAR1P56945 870 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 GRIK3Q13003 919 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 HLTFQ14527 1009 aaKnown RBP eCLIP15.06■□□□□ 0
HMGA1-203ENST00000374116 TMEM132DQ14C87 1099 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 TRADDQ15628 312 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 RAB30Q15771 203 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 KYAT1Q16773 422 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 FAM43BQ6ZT52 329 aaPredicted RBP15.06■□□□□ 0
HMGA1-203ENST00000374116 MAB21L3Q8N8X9 362 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 BCL7CQ8WUZ0 217 aaPredicted RBP15.06■□□□□ 0
HMGA1-203ENST00000374116 ARNTL2Q8WYA1 636 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 SEC14L1Q92503 715 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 P3H4Q92791 437 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 CGRRF1Q99675 332 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 PI4K2AQ9BTU6 479 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 MRPL9Q9BYD2 267 aaKnown RBP15.06■□□□□ 0
HMGA1-203ENST00000374116 MTMR12Q9C0I1 747 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 PLEKHA5Q9HAU0 1116 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.06■□□□□ 0
HMGA1-203ENST00000374116 FAM114A2Q9NRY5 505 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 UVRAGQ9P2Y5 699 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 AMACRQ9UHK6 382 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 GTF3C4Q9UKN8 822 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 NRP1O14786 923 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 INPPL1O15357 1258 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 FAM107AO95990 144 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 ECHS1P30084 290 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 SLC8A1P32418 973 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 CTNNB1P35222 781 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 POU5F1Q01860 360 aaKnown RBP15.05■□□□□ -0
HMGA1-203ENST00000374116 DSC1Q08554 894 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 PDCLQ13371 301 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 ZKSCAN8Q15776 578 aaPredicted RBP15.05■□□□□ -0
HMGA1-203ENST00000374116 ACAD10Q6JQN1 1059 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 KCNT2Q6UVM3 1135 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 COLGALT1Q8NBJ5 622 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 C3orf58Q8NDZ4 430 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 ALG3Q92685 438 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 LRRC45Q96CN5 670 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 ZSWIM1Q9BR11 485 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 ALG13Q9NP73 1137 aaKnown RBP15.05■□□□□ -0
HMGA1-203ENST00000374116 KANSL3Q9P2N6 904 aa15.05■□□□□ -0
HMGA1-203ENST00000374116 UTP11Q9Y3A2 253 aaKnown RBP15.05■□□□□ -0
HMGA1-203ENST00000374116 I3L4J1 428 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 GALTP07902 379 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 EZRP15311 586 aaKnown RBP15.04■□□□□ -0
HMGA1-203ENST00000374116 ACO1P21399 889 aaKnown RBP15.04■□□□□ -0
HMGA1-203ENST00000374116 CDR1P51861 262 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 BPIFB4P59827 614 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 TUSC3Q13454 348 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 ZBTB6Q15916 424 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 WDR44Q5JSH3 913 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 Q7L0L9 218 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 CLP1Q92989 425 aaKnown RBP15.04■□□□□ -0
HMGA1-203ENST00000374116 ARL8AQ96BM9 186 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 SGSM3Q96HU1 749 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 NUP85Q9BW27 656 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 RAB17Q9H0T7 212 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 TTYH1Q9H313 450 aaPredicted RBP15.04■□□□□ -0
HMGA1-203ENST00000374116 ASB7Q9H672 318 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 APOBEC3GQ9HC16 384 aaKnown RBP15.04■□□□□ -0
HMGA1-203ENST00000374116 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.04■□□□□ -0
HMGA1-203ENST00000374116 CNTN6Q9UQ52 1028 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 REV3LO60673 3130 aa15.04■□□□□ -0
HMGA1-203ENST00000374116 KLHL33A6NCF5 533 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 FAM187AA6NFU0 413 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 TTI1O43156 1089 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 IL18RAPO95256 599 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 KRT5P13647 590 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 COMTP21964 271 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 ALDH7A1P49419 539 aaKnown RBP15.03■□□□□ -0
HMGA1-203ENST00000374116 MESDQ14696 234 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 SKIDA1Q1XH10 827 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 CLEC16AQ2KHT3 1053 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 ZNF677Q86XU0 584 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 PARP9Q8IXQ6 854 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 KLHL23Q8NBE8 558 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 MYCBPAPQ8TBZ2 947 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 ZNF564Q8TBZ8 553 aaPredicted RBP15.03■□□□□ -0
HMGA1-203ENST00000374116 PIK3R5Q8WYR1 880 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 ZNF653Q96CK0 615 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 ZNF576Q9H609 170 aa15.03■□□□□ -0
HMGA1-203ENST00000374116 PLXNA4Q9HCM2 1894 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms