RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 PCYOX1Q9UHG3 505 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 MYPNQ86TC9 1320 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 LOC102724159A0A0B4J2E5 919 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 ADM5C9JUS6 153 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 DIAPH2O60879 1101 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 SRP72O76094 671 aaKnown RBP11.03□□□□□ -0.64
PGK1-201ENST00000373316 PWP2Q15269 919 aaKnown RBP11.03□□□□□ -0.64
PGK1-201ENST00000373316 KIAA1841Q6NSI8 718 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 KATNAL2Q8IYT4 538 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 ABRAQ8N0Z2 381 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 KIAA0895Q8NCT3 520 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 ZNF526Q8TF50 670 aaPredicted RBP11.03□□□□□ -0.64
PGK1-201ENST00000373316 TFB1MQ8WVM0 346 aaKnown RBP11.03□□□□□ -0.64
PGK1-201ENST00000373316 LZICQ8WZA0 190 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 STN1Q9H668 368 aaKnown RBP11.03□□□□□ -0.64
PGK1-201ENST00000373316 SEPT3Q9UH03 358 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 PCSK1NQ9UHG2 260 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 NFASCO94856 1347 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 TBC1D12O60347 775 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 GPAT2Q6NUI2 795 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 C3orf62Q6ZUJ4 267 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 SLC26A11Q86WA9 606 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 LRRC6Q86X45 466 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 ATPAF2Q8N5M1 289 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 SPATA18Q8TC71 538 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 FAXDC2Q96IV6 333 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 KCNMB3Q9NPA1 279 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 RAB6BQ9NRW1 208 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 ABCF3Q9NUQ8 709 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 VTI1BQ9UEU0 232 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 CAPN6Q9Y6Q1 641 aa11.03□□□□□ -0.64
PGK1-201ENST00000373316 LCA5LO95447 670 aa11.02□□□□□ -0.64
PGK1-201ENST00000373316 RBP3P10745 1247 aa11.02□□□□□ -0.64
PGK1-201ENST00000373316 INPP1P49441 399 aa11.02□□□□□ -0.64
PGK1-201ENST00000373316 TAF6P49848 677 aa11.02□□□□□ -0.64
PGK1-201ENST00000373316 CYB5D1Q6P9G0 228 aa11.02□□□□□ -0.64
PGK1-201ENST00000373316 ZNF571Q7Z3V5 609 aaPredicted RBP11.02□□□□□ -0.64
PGK1-201ENST00000373316 CDK5RAP1Q96SZ6 601 aaKnown RBP11.02□□□□□ -0.64
PGK1-201ENST00000373316 SPON1Q9HCB6 807 aa11.02□□□□□ -0.64
PGK1-201ENST00000373316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.02□□□□□ -0.64
PGK1-201ENST00000373316 LYPLA2O95372 231 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 KRT4P19013 534 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 EIF4BP23588 611 aaKnown RBP11.02□□□□□ -0.65
PGK1-201ENST00000373316 RECQLP46063 649 aaPredicted RBP11.02□□□□□ -0.65
PGK1-201ENST00000373316 KPNA1P52294 538 aaPredicted RBP11.02□□□□□ -0.65
PGK1-201ENST00000373316 CDK16Q00536 496 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 LONRF1Q17RB8 773 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 TRMT5Q32P41 509 aaKnown RBP11.02□□□□□ -0.65
PGK1-201ENST00000373316 AARS2Q5JTZ9 985 aaKnown RBP11.02□□□□□ -0.65
PGK1-201ENST00000373316 PRMT9Q6P2P2 845 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 SPOCD1Q6ZMY3 1216 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 ASB2Q96Q27 587 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 RAD54BQ9Y620 910 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 MYH4Q9Y623 1939 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 ZNF197O14709 1029 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 CFLARO15519 480 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 FCGR1AP12314 374 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 PBX1P40424 430 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 GRM1Q13255 1194 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 CCDC153Q494R4 210 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 TMCO4Q5TGY1 634 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 LVRNQ6Q4G3 990 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 CPA5Q8WXQ8 436 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 RMDN1Q96DB5 314 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 VAT1Q99536 393 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 ANGPT2O15123 496 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 CST8O60676 142 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 NUDT17P0C025 328 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 PTPN4P29074 926 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 GCLCP48506 637 aaPredicted RBP11.02□□□□□ -0.65
PGK1-201ENST00000373316 CPT1AP50416 773 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 VCPP55072 806 aaKnown RBP11.02□□□□□ -0.65
PGK1-201ENST00000373316 POLE2P56282 527 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 ZNF235Q14590 738 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 VEPH1Q14D04 833 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 MAP4K3Q8IVH8 894 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 TAB3Q8N5C8 712 aaPredicted RBP11.02□□□□□ -0.65
PGK1-201ENST00000373316 OR6J1Q8NGC5 347 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 OSBPL1AQ9BXW6 950 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 LRRC40Q9H9A6 602 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 TRPC7Q9HCX4 862 aa11.02□□□□□ -0.65
PGK1-201ENST00000373316 FOXN3O00409 490 aaPredicted RBP11.01□□□□□ -0.65
PGK1-201ENST00000373316 CETPP11597 493 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 HNRNPH1P31943 449 aaKnown RBP11.01□□□□□ -0.65
PGK1-201ENST00000373316 BCAT1P54687 386 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 SLC12A3P55017 1021 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 SCARA3Q6AZY7 606 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 CRELD2Q6UXH1 353 aaPredicted RBP11.01□□□□□ -0.65
PGK1-201ENST00000373316 TMC3Q7Z5M5 1100 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 RAB42Q8N4Z0 105 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 ZBTB9Q96C00 473 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 ERP27Q96DN0 273 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 SH2D3AQ9BRG2 576 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 CLUHO75153 1309 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 SDR42E2A6NKP2 422 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 ERI2A8K979 691 aaKnown RBP11.01□□□□□ -0.65
PGK1-201ENST00000373316 M0R2N6 131 aa11.01□□□□□ -0.65
PGK1-201ENST00000373316 DNALI1O14645 258 aaPredicted RBP11.01□□□□□ -0.65
PGK1-201ENST00000373316 ABL1P00519 1130 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms