RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 LIG4P49917 911 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 HSD17B4P51659 736 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 ALDH18A1P54886 795 aaKnown RBP14.31□□□□□ -0.12
USP49-201ENST00000373006 KRT72Q14CN4 511 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 SCUBE1Q8IWY4 988 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 CTAGE3PQ8IX95 158 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 ALKBH8Q96BT7 664 aaKnown RBP14.31□□□□□ -0.12
USP49-201ENST00000373006 MASTLQ96GX5 879 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 TRAPPC9Q96Q05 1148 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 SLC13A1Q9BZW2 595 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 UBIAD1Q9Y5Z9 338 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 TCRBV9S1A1TA0A576 114 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 CCDC160A6NGH7 325 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 CYB561D2O14569 222 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 INHBAP08476 426 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 HARSP12081 509 aaKnown RBP14.31□□□□□ -0.12
USP49-201ENST00000373006 MCL1Q07820 350 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 DGKZQ13574 1117 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 CIAPIN1Q6FI81 312 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 TRIM72Q6ZMU5 477 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 TIPINQ9BVW5 301 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 IQCGQ9H095 443 aaKnown RBP14.31□□□□□ -0.12
USP49-201ENST00000373006 PREBQ9HCU5 417 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 TBC1D22BQ9NU19 505 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 NFASCO94856 1347 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 KLRG2A4D1S0 409 aaPredicted RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 CCNFP41002 786 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 MCCD1P59942 119 aaPredicted RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 C1orf146Q5VVC0 180 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 PCGF5Q86SE9 256 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 OR5B17Q8NGF7 314 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 APOPT1Q96IL0 206 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 ACAP3Q96P50 834 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 MMADHCQ9H3L0 296 aaPredicted RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 PRDM16Q9HAZ2 1276 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 GABBR1Q9UBS5 961 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 PPM1HQ9ULR3 514 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 IQANK1A0A1B0GTG1 560 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 CREB3O43889 395 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 ATP6V1G1O75348 118 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 DHRS4L1P0CG22 281 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 CHRNA5P30532 468 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 TMPRSS15P98073 1019 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 CFAP157Q5JU67 520 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 STRIP1Q5VSL9 837 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 OLFML2BQ68BL8 750 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 PRPF39Q86UA1 669 aaKnown RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 TMPRSS6Q8IU80 811 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 ARHGAP24Q8N264 748 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP49-201ENST00000373006 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 ASCC2Q9H1I8 757 aaPredicted RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 PCSK1NQ9UHG2 260 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 SLC7A8Q9UHI5 535 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 MEI4A8MW99 385 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 A8MXQ7 604 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 WDR64B1ANS9 1081 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 ZNF862O60290 1169 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 TGDSO95455 350 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 ZNF200P98182 395 aaPredicted RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 DSG1Q02413 1049 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 DLGAP5Q15398 846 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 CES4AQ5XG92 561 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 CC2D2BQ6DHV5 1058 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 ULK2Q8IYT8 1036 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 RILPQ96NA2 401 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 NTPCRQ9BSD7 190 aaKnown RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 PHACTR1Q9C0D0 580 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 RAVER2Q9HCJ3 691 aaKnown RBP14.3□□□□□ -0.12
USP49-201ENST00000373006 ANGPTL2Q9UKU9 493 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 STRIP2Q9ULQ0 834 aa14.3□□□□□ -0.12
USP49-201ENST00000373006 ZNF536O15090 1300 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.29□□□□□ -0.12
USP49-201ENST00000373006 COPEO14579 308 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 EXTL3O43909 919 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 IL1R2P27930 398 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 AQP5P55064 265 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 RTP1P59025 263 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 BST1Q10588 318 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 PPM1NQ8N819 430 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 CFAP36Q96G28 342 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 GALNT8Q9NY28 637 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 PDP2Q9P2J9 529 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 TJP2Q9UDY2 1190 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 AGO2Q9UKV8 859 aaKnown RBP14.29□□□□□ -0.12
USP49-201ENST00000373006 TRIM49D1C9J1S8 452 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 GARTP22102 1010 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 RFC1P35251 1148 aaPredicted RBP14.29□□□□□ -0.12
USP49-201ENST00000373006 MAGEA10P43363 369 aaPredicted RBP14.29□□□□□ -0.12
USP49-201ENST00000373006 CNPY1Q3B7I2 92 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 ECSITQ9BQ95 431 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 HAPLN2Q9GZV7 340 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 ANKEF1Q9NU02 776 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 NDE1Q9NXR1 346 aa14.29□□□□□ -0.12
USP49-201ENST00000373006 RBAKQ9NYW8 714 aaPredicted RBP14.29□□□□□ -0.12
USP49-201ENST00000373006 SERPINA10Q9UK55 444 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms