RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 IL23AQ9NPF7 189 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ZFATQ9P243 1243 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 NOCTQ9UK39 431 aaKnown RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ST3GAL5Q9UNP4 418 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 TRIP12Q14669 1992 aaPredicted RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 FAM47DPA6NHR8 397 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 GPR182O15218 404 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 PRPF4O43172 522 aaKnown RBP eCLIP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 THAP12O43422 761 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 EXOC3O60645 756 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 FESP07332 822 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 MARCKSL1P49006 195 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 LRRC14Q15048 493 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 TCTN1Q2MV58 587 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 SGO2Q562F6 1265 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 CGB2Q6NT52 195 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ZNF365Q70YC5 407 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 OTOP2Q7RTS6 562 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 CATSPER4Q7RTX7 472 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 APBB1IPQ7Z5R6 666 aaPredicted RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ECHDC2Q86YB7 292 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ATL2Q8NHH9 583 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 UHMK1Q8TAS1 419 aaKnown RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ZNF483Q8TF39 744 aaPredicted RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 STK32AQ8WU08 396 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 SLC20A1Q8WUM9 679 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 SEPT8Q92599 483 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 TUBB6Q9BUF5 446 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 ETNK1Q9HBU6 452 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 UBE2TQ9NPD8 197 aaPredicted RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 SMG5Q9UPR3 1016 aaKnown RBP12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 STK38LQ9Y2H1 464 aa12.04□□□□□ -0.48
TSPAN1-201ENST00000372003 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ALPK3Q96L96 1907 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 MYH11P35749 1972 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 KAT6AQ92794 2004 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 K7ENM7 598 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 K7ERI5 159 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ACSL3O95573 720 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 FGBP02675 491 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 CXCL10P02778 98 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ATF2P15336 505 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ACADSP16219 412 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 CHRNB2P17787 502 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ATP6V1C1P21283 382 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 VAMP7P51809 220 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 CCNHP51946 323 aaPredicted RBP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 RNASELQ05823 741 aaKnown RBP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 MBTD1Q05BQ5 628 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 POU5F1BQ06416 359 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ENPEPQ07075 957 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 PLEKHG4Q58EX7 1191 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 CCDC25Q86WR0 208 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 CCDC89Q8N998 374 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ANKRD42Q8N9B4 389 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 MGARPQ8TDB4 240 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 MICAL1Q8TDZ2 1067 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 EPS8L1Q8TE68 723 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 PRCCQ92733 491 aaPredicted RBP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 TRIM11Q96F44 468 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 RMDN2Q96LZ7 410 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 TTC25Q96NG3 672 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 NTPCRQ9BSD7 190 aaKnown RBP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 DDX23Q9BUQ8 820 aaKnown RBP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 NUP85Q9BW27 656 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 UBE2OQ9C0C9 1292 aaKnown RBP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 C2orf40Q9H1Z8 148 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 TLE6Q9H808 572 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 SSU72Q9NP77 194 aaKnown RBP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 AVENQ9NQS1 362 aaPredicted RBP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 SAR1AQ9NR31 198 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 NINJ2Q9NZG7 142 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ASIC3Q9UHC3 531 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 ANAPC5Q9UJX4 755 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 SQORQ9Y6N5 450 aa12.03□□□□□ -0.48
TSPAN1-201ENST00000372003 DENND3A2RUS2 1198 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 TMEM110-MUSTN1A8MSY1 372 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 TRIM49P0CI25 452 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 TRIM49CP0CI26 452 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 MYBL1P10243 752 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 CYP2J2P51589 502 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 ITGA8P53708 1063 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 MFAP3P55082 362 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 MGAT5Q09328 741 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 SPARCL1Q14515 664 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 MAPK6Q16659 721 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 TSNAXIP1Q2TAA8 658 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 ZC2HC1CQ53FD0 456 aaPredicted RBP12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 UBAP2Q5T6F2 1119 aaKnown RBP12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 NAIF1Q69YI7 327 aaPredicted RBP12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 HAUS6Q7Z4H7 955 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 VSIG1Q86XK7 387 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 KIF2BQ8N4N8 673 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 TMEM161BQ8NDZ6 487 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 CPB2Q96IY4 423 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 LRRC37BQ96QE4 947 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms