RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 NFIL3Q16649 462 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 UPP1Q16831 310 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 KNOP1Q1ED39 458 aaKnown RBP8.84□□□□□ -0.99
COL21A1-202ENST00000370817 DDX53Q86TM3 631 aaKnown RBP8.84□□□□□ -0.99
COL21A1-202ENST00000370817 BRSK2Q8IWQ3 736 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 EFCAB13Q8IY85 973 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 GUF1Q8N442 669 aaKnown RBP8.84□□□□□ -0.99
COL21A1-202ENST00000370817 AGBL5Q8NDL9 886 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 C3orf58Q8NDZ4 430 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 POF1BQ8WVV4 589 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 POMGNT1Q8WZA1 660 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 UBXN4Q92575 508 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 ERCC4Q92889 916 aaPredicted RBP8.84□□□□□ -0.99
COL21A1-202ENST00000370817 ALKBH8Q96BT7 664 aaKnown RBP8.84□□□□□ -0.99
COL21A1-202ENST00000370817 DMRTB1Q96MA1 342 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 RPS6KC1Q96S38 1066 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 TSPAN18Q96SJ8 248 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 ZBP1Q9H171 429 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 HSPBP1Q9NZL4 362 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 CGNQ9P2M7 1197 aaKnown RBP8.84□□□□□ -0.99
COL21A1-202ENST00000370817 TRAF3IP3Q9Y228 551 aa8.84□□□□□ -0.99
COL21A1-202ENST00000370817 GREB1Q4ZG55 1949 aa8.84□□□□□ -1
COL21A1-202ENST00000370817 DENND4CQ5VZ89 1909 aa8.84□□□□□ -1
COL21A1-202ENST00000370817 NOTCH4Q99466 2003 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 PDXKO00764 312 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 SCAMP3O14828 347 aaKnown RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 EXTL3O43909 919 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 KINO60870 393 aaKnown RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 CYP3A5P20815 502 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 ALDH7A1P49419 539 aaKnown RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 YARSP54577 528 aaKnown RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 CDK5R2Q13319 367 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 KCNC3Q14003 757 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 HSP90AA2PQ14568 343 aaPredicted RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 SPOUT1Q5T280 376 aaKnown RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 ZNF658Q5TYW1 1059 aaPredicted RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 ARMCX5Q6P1M9 558 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 WFDC3Q8IUB2 231 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 CD302Q8IX05 232 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 NELFCDQ8IXH7 590 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 ZC3H3Q8IXZ2 948 aaKnown RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 GPD1LQ8N335 351 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 CXorf38Q8TB03 319 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 GPT2Q8TD30 523 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 C18orf25Q96B23 403 aaPredicted RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 SAAL1Q96ER3 474 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 CCDC34Q96HJ3 373 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 UROC1Q96N76 676 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 GBP4Q96PP9 640 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 FANCD2OSQ96PS1 177 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 HERC2P3Q9BVR0 1158 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 ASB7Q9H672 318 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 RPF1Q9H9Y2 349 aaKnown RBP8.83□□□□□ -1
COL21A1-202ENST00000370817 TLR9Q9NR96 1032 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 CHST7Q9NS84 486 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 TUBGCP4Q9UGJ1 667 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 MAN1B1Q9UKM7 699 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 FAN1Q9Y2M0 1017 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 DERAQ9Y315 318 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 C2CD2Q9Y426 696 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 PCDHGC5Q9Y5F6 944 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 IRAK3Q9Y616 596 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 OBSL1O75147 1896 aa8.83□□□□□ -1
COL21A1-202ENST00000370817 PTPRJQ12913 1337 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 ANO9A1A5B4 782 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 CASTOR2A6NHX0 329 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 LDHAP00338 332 aaKnown RBP8.82□□□□□ -1
COL21A1-202ENST00000370817 SOD2P04179 222 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 ALDH2P05091 517 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 GSTP1P09211 210 aaKnown RBP8.82□□□□□ -1
COL21A1-202ENST00000370817 CTSAP10619 480 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 PRCPP42785 496 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 MATR3P43243 847 aaKnown RBP eCLIP8.82□□□□□ -1
COL21A1-202ENST00000370817 OR1G1P47890 313 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 AARSP49588 968 aaKnown RBP eCLIP8.82□□□□□ -1
COL21A1-202ENST00000370817 CLCNKBP51801 687 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 ID3Q02535 119 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 PPP2R3AQ06190 1150 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 MORC3Q14149 939 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 MYBPC2Q14324 1141 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 PTPROQ16827 1216 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 TIGD5Q53EQ6 642 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 SPATA1Q5VX52 437 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 JADE1Q6IE81 842 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 CENPPQ6IPU0 288 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 ZNF574Q6ZN55 896 aaPredicted RBP8.82□□□□□ -1
COL21A1-202ENST00000370817 RBM43Q6ZSC3 357 aaKnown RBP8.82□□□□□ -1
COL21A1-202ENST00000370817 ADGRD2Q7Z7M1 963 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 NT5DC4Q86YG4 428 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 CBWD2Q8IUF1 395 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 GPR65Q8IYL9 337 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 SMYD4Q8IYR2 804 aaPredicted RBP8.82□□□□□ -1
COL21A1-202ENST00000370817 SYCP3Q8IZU3 236 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 ADSSL1Q8N142 457 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 MAFAQ8NHW3 353 aaPredicted RBP8.82□□□□□ -1
COL21A1-202ENST00000370817 PLEKHO2Q8TD55 490 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 RABGGTAQ92696 567 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 SMARCE1Q969G3 411 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 TMEM169Q96HH4 297 aa8.82□□□□□ -1
COL21A1-202ENST00000370817 FAM193BQ96PV7 902 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms