RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SRBD1Q8N5C6 995 aaKnown RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.9□□□□□ -0.342e-7■■□□□ 12.3
HCFC1-202ENST00000369984 KCND2Q9NZV8 630 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 CTNNAL1Q9UBT7 734 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 KLHL20Q9Y2M5 609 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 NCF1BA6NI72 391 aaPredicted RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 NCF1CA8MVU1 366 aaPredicted RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 PSMD14O00487 310 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 NCF1P14598 390 aaPredicted RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 DARSP14868 501 aaKnown RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 FEN1P39748 380 aaKnown RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 C1DQ13901 141 aaKnown RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 DPF2Q92785 391 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 SMNDC1O75940 238 aaKnown RBP eCLIP12.9□□□□□ -0.342e-10■■■□□ 15.2
HCFC1-202ENST00000369984 ALOX15P16050 662 aaPredicted RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 ATP6V1B2P21281 511 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 SV2CQ496J9 727 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 QKIQ96PU8 341 aaKnown RBP eCLIP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 CINPQ9BW66 212 aaPredicted RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 TMEM8AQ9HCN3 771 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 A0A1W2PQJ5 194 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 CST8O60676 142 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 KCNJ1P48048 391 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 CHRNB3Q05901 458 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 CCDC126Q96EE4 140 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 SH2D3AQ9BRG2 576 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 C2orf81A6NN90 581 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 E9PBE3 544 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 MTSS1O43312 755 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 CLPTM1O96005 669 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 MMP10P09238 476 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 TMEM62Q0P6H9 643 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 ADRM1Q16186 407 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF669Q96BR6 464 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-202ENST00000369984 NMD3Q96D46 503 aaKnown RBP12.89□□□□□ -0.35
HCFC1-202ENST00000369984 RMND5AQ9H871 391 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 ERAP1Q9NZ08 941 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 SCTRP47872 440 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 SERPINB8P50452 374 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 NME5P56597 212 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 SLC44A2Q8IWA5 706 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-202ENST00000369984 DPP10Q8N608 796 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 VTA1Q9NP79 307 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 TMCC3Q9ULS5 477 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 PEX1O43933 1283 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 SKAP2O75563 359 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-202ENST00000369984 COILP38432 576 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-202ENST00000369984 ANXA11P50995 505 aaKnown RBP12.89□□□□□ -0.35
HCFC1-202ENST00000369984 OVGP1Q12889 678 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 EPHA7Q15375 998 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 GPAT2Q6NUI2 795 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 KRT74Q7RTS7 529 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 SUGP1Q8IWZ8 645 aaKnown RBP12.89□□□□□ -0.35
HCFC1-202ENST00000369984 EFCAB1Q9HAE3 211 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 GALNT8Q9NY28 637 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 DGAT1O75907 488 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 IL12RB1P42701 662 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 PDZK1Q5T2W1 519 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 NAPEPLDQ6IQ20 393 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 NEK10Q6ZWH5 1172 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 FAR2Q96K12 515 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 MFN2O95140 757 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 OTUD4Q01804 1114 aaKnown RBP12.89□□□□□ -0.35
HCFC1-202ENST00000369984 FEZF2Q8TBJ5 459 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 CCSER1Q9C0I3 900 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 CD209Q9NNX6 404 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 OLFML1Q6UWY5 402 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 NANOGNBQ7Z5D8 188 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 VN1R5Q7Z5H4 357 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 MTA3Q9BTC8 594 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
HCFC1-202ENST00000369984 TRAF2Q12933 501 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 TFDP3Q5H9I0 405 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 FAM45BPQ6NSW5 357 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 TRIM48Q8IWZ4 208 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 UBA3Q8TBC4 463 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 LRRC39Q96DD0 335 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 SLC25A13Q9UJS0 675 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 PCDHB2Q9Y5E7 798 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 REREQ9P2R6 1566 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 RFX3P48380 749 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 MTMR2Q13614 643 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 TAF2Q6P1X5 1199 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF677Q86XU0 584 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ANKRD7Q92527 254 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 MTIF3Q9H2K0 278 aaKnown RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 FDFT1P37268 417 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 FXR1P51114 621 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■■□□ 16.9
HCFC1-202ENST00000369984 SEL1L3Q68CR1 1132 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 CYP4Z1Q86W10 505 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 DENND6AQ8IWF6 608 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms